Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1851

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1850: 10218 - K00311 ETFDH electron-transferring-flavoprotein dehydrogenase, at 368575 to 371026 10218 mRNA_1851: 10219 - BLAST cell wall surface anchor family protein [Moniliop..., at 371748 to 376200 10219 mRNA_1852: 10220 - K06133 LYS5, acpT 4'-phosphopantetheinyl transferase, at 376283 to 377328 10220

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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370,754 - 10218 mRNA_1850 0.89 0.2
370,768 + 10218 mRNA_1850 0.89 -0.3
370,915 - -0.1
370,922 - -1.6
370,923 - -0.8
371,044 - 0.3
371,045 - -0.2
371,052 + -0.6
371,052 - -0.0
371,054 + -0.3
371,060 + 0.1
371,060 - 0.2
371,063 + -0.9
371,072 - -0.9
371,073 + -0.0
371,073 - 1.2
371,076 - 0.8
371,077 + 0.3
371,080 + -0.2
371,084 + 1.5
371,089 - -0.8
371,090 + -2.9
371,097 + -0.6
371,168 - -0.1
371,219 + 0.4
371,239 + 0.6
371,253 + 0.4
371,382 + -2.1
371,382 - 1.0
371,383 - -0.2
371,392 + -0.2
371,392 + -1.2
371,394 - 0.6
371,394 - -0.5
371,518 - 1.9
371,528 + 0.9
371,648 + -0.2
371,804 - 0.1
372,134 - 0.2
372,423 + 10219 mRNA_1851 0.15 -1.8
372,722 + 10219 mRNA_1851 0.22 0.7
372,993 + 10219 mRNA_1851 0.28 0.4
373,005 + 10219 mRNA_1851 0.28 -0.1
373,111 - 10219 mRNA_1851 0.31 1.9
373,428 + 10219 mRNA_1851 0.38 0.2
374,097 - 10219 mRNA_1851 0.53 1.5
374,135 - 10219 mRNA_1851 0.54 0.2
374,415 + 10219 mRNA_1851 0.60 -1.1
374,416 - 10219 mRNA_1851 0.60 -1.9
374,427 - 10219 mRNA_1851 0.60 0.9
374,444 - 10219 mRNA_1851 0.61 0.3
374,610 + 10219 mRNA_1851 0.64 -0.4
375,303 + 10219 mRNA_1851 0.80 0.4
375,659 + 10219 mRNA_1851 0.88 0.8
376,266 + -1.1