Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1836

Experiments: Dropout Complete

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1836: 10204 - HMMPfam-PH domain-PF00169,ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF103657,SUPERFAMILY--SSF50729, at 329163 to 331495 10204 mRNA_1837: 10205 - K00281 GLDC, gcvP glycine dehydrogenase, at 331991 to 335971 10205

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Per-strain Table

Position Strand Gene Sysname Fraction Dropout Complete
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328,228 - -0.4
328,263 + 0.1
328,654 - 0.9
328,665 - -1.5
328,677 + -0.7
328,679 + 0.0
328,819 - -0.6
328,823 - 0.1
328,824 - -0.6
328,828 + -1.1
328,842 + -1.8
328,846 - 0.4
328,877 - 0.2
328,891 + -1.2
328,971 - 0.4
328,991 - 0.2
328,991 + 0.0
328,994 + 0.9
329,007 + -0.4
329,009 - -0.0
329,013 + 0.7
329,022 + 1.6
329,022 - -0.7
329,023 - 0.5
329,030 + -0.7
329,072 + 0.0
329,072 - -0.3
329,077 + 0.9
329,078 - 2.4
329,080 - -1.7
329,090 - 0.6
329,094 - -0.4
329,097 + 1.0
329,110 + 1.1
329,111 - -1.7
329,114 + 0.6
329,127 + -0.3
329,136 + 0.1
329,259 - -2.3
329,269 + 0.2
329,392 + 1.0
329,519 + 10204 mRNA_1836 0.15 -0.3
329,542 + 10204 mRNA_1836 0.16 -1.0
329,544 - 10204 mRNA_1836 0.16 0.3
329,872 + 10204 mRNA_1836 0.30 0.2
330,250 + 10204 mRNA_1836 0.47 0.3
330,334 - 10204 mRNA_1836 0.50 0.2
330,629 + 10204 mRNA_1836 0.63 0.9
330,698 - 10204 mRNA_1836 0.66 0.7
330,902 - 10204 mRNA_1836 0.75 -0.3
331,610 + -0.0
331,748 - -1.1
331,855 + 0.1
331,862 - 1.5
331,868 - 0.5
331,878 + 0.9
331,903 + -1.8
331,988 - 0.1
332,007 - 0.1
332,013 - -0.2
332,014 - 0.1
332,014 + -1.1
332,014 + 0.8
332,014 - -0.5
332,015 + 0.8
332,039 + -0.5
332,055 + 1.4
332,174 - -0.0
332,315 + 3.7
332,343 + -1.2
332,475 - 10205 mRNA_1837 0.12 -0.6