Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1325

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1325: 9693 - KOG1960 Predicted RNA-binding protein, contains KH domains, at 934914 to 938027 9693

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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933,927 + 0.8
933,938 - 0.4
933,942 - 3.2
933,984 + -1.6
933,990 - -0.1
934,003 - 2.2
934,284 + 0.1
934,292 - 0.7
934,322 + 0.1
934,378 - 0.7
934,416 - 0.6
934,417 + -2.1
934,701 + 0.6
934,734 + 0.2
934,811 - -1.7
935,144 - 0.1
935,150 + 0.1
935,270 + 9693 mRNA_1325 0.11 -0.4
935,275 - 9693 mRNA_1325 0.12 1.1
935,279 - 9693 mRNA_1325 0.12 -1.3
935,390 - 9693 mRNA_1325 0.15 -0.8
935,433 - 9693 mRNA_1325 0.17 -0.2
936,305 + 9693 mRNA_1325 0.45 -0.2
936,365 + 9693 mRNA_1325 0.47 -0.7
936,430 - 9693 mRNA_1325 0.49 1.1
936,605 - 9693 mRNA_1325 0.54 -1.3
936,730 - 9693 mRNA_1325 0.58 -1.4
936,732 + 9693 mRNA_1325 0.58 -0.2
937,097 + 9693 mRNA_1325 0.70 -2.5
937,386 + 9693 mRNA_1325 0.79 -0.1
937,393 + 9693 mRNA_1325 0.80 -0.6
937,498 - 9693 mRNA_1325 0.83 -0.6
937,540 - 9693 mRNA_1325 0.84 1.0
937,569 - 9693 mRNA_1325 0.85 2.1
937,635 + 9693 mRNA_1325 0.87 1.1
937,728 + 1.0
937,741 + 0.1
937,754 - 0.2
937,760 - 1.3
937,763 - 0.5
937,803 + 2.4
937,806 - -1.9
937,832 - 0.2
937,838 - 1.1
937,885 + -0.1
937,898 - 0.9
937,954 - 1.6
938,042 - -1.2
938,046 - 0.6
938,050 - 2.3
938,054 + 0.1
938,058 + -0.1
938,061 - 0.2
938,066 - 0.0
938,073 - 0.5
938,094 - -0.1
938,113 - -0.4
938,116 + -1.0
938,134 + 1.8
938,134 + -1.0
938,136 - -1.8
938,141 - 2.3
938,172 - 0.3
938,177 - 0.7
938,179 - 0.8
938,183 - -0.3
938,186 - -0.6
938,190 - -3.1
938,190 - 0.6
938,190 - -1.4
938,190 - 0.4
938,190 - -0.6