Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1279

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1278: 9646 - KOG1414 Transcriptional activator FOSB/c-Fos and related bZIP transcription factors, at 819504 to 821830 9646 mRNA_1279: 9647 - BLAST family 16 carbohydrate esterase [Melampsora laric..., at 822626 to 824265 9647

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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821,706 - 1.0
821,717 - 0.9
821,730 + 0.0
821,744 + 0.7
821,748 + 0.8
821,752 - 0.7
821,755 + 1.0
821,764 + -0.9
821,835 + 0.3
821,887 + 0.4
821,911 + 0.4
821,919 + 0.6
821,919 + -0.6
821,921 + 0.8
821,922 - 1.4
821,923 - 0.6
821,923 + -0.3
821,924 + -0.4
821,927 + 0.2
821,928 + 0.4
821,929 - 1.2
821,931 + 0.6
821,939 - 0.3
821,940 - -1.8
821,941 - 1.0
821,941 + 0.5
821,965 + -0.2
821,970 - -2.0
821,975 - 1.2
821,983 - 0.7
821,996 - 0.7
822,000 - -0.0
822,004 - -0.3
822,005 - 1.2
822,091 - -0.6
822,179 - 0.4
822,180 + 0.8
822,189 - -0.3
822,208 - 2.4
822,214 - 1.7
822,214 - -0.1
822,231 - 0.7
822,235 - 0.4
822,242 + 1.0
822,242 + -1.2
822,249 + -0.2
822,250 + 1.1
822,257 - -0.7
822,259 + 0.8
822,262 + -0.1
822,266 - -0.9
822,375 + 0.8
822,377 + 2.5
823,107 - 9647 mRNA_1279 0.29 0.6
823,108 + 9647 mRNA_1279 0.29 0.4
823,119 + 9647 mRNA_1279 0.30 0.3
823,440 - 9647 mRNA_1279 0.50 -0.1
823,448 + 9647 mRNA_1279 0.50 0.0
823,697 - 9647 mRNA_1279 0.65 -0.4
823,735 + 9647 mRNA_1279 0.68 0.9
824,015 + 9647 mRNA_1279 0.85 0.0
824,386 - 3.4
824,792 - -0.4
824,796 + -0.2
824,800 + 1.8
824,821 + 0.4
824,821 + 1.1
824,866 + -0.4
824,874 - 0.0
824,874 + 1.5
824,894 + -0.1
825,013 + -0.5
825,046 - 0.4
825,053 + -0.2
825,054 - 0.2
825,095 - 0.7
825,116 - -0.3
825,141 + 2.5
825,141 + -1.1
825,178 - -0.3
825,184 - -0.4
825,190 + -0.3
825,191 - 0.7
825,193 - 0.3
825,198 + -0.1
825,200 - -2.2
825,206 + -0.3
825,211 + 1.4
825,211 + 2.5
825,224 - 0.3
825,241 - -0.8
825,243 + 0.3
825,244 - -0.2
825,245 - 0.6