Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1274

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1273: 9641 - BLAST priB [Histoplasma capsulatum H143], at 808747 to 810374 9641 mRNA_1274: 9642 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 810580 to 813182 9642 mRNA_1275: 9643 - K11426 SMYD SET and MYND domain-containing protein, at 813494 to 815725 9643

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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809,782 + 9641 mRNA_1273 0.64 0.3
810,331 - -0.0
810,350 + -0.5
810,351 - 1.0
810,480 + 1.8
810,515 + 2.2
810,798 - 0.6
810,820 - -0.0
810,918 + 9642 mRNA_1274 0.13 0.1
810,919 - 9642 mRNA_1274 0.13 0.1
810,922 + 9642 mRNA_1274 0.13 1.8
811,122 - 9642 mRNA_1274 0.21 0.2
811,129 + 9642 mRNA_1274 0.21 2.5
811,132 - 9642 mRNA_1274 0.21 -0.2
811,202 + 9642 mRNA_1274 0.24 1.9
811,206 - 9642 mRNA_1274 0.24 -0.7
811,250 - 9642 mRNA_1274 0.26 1.6
811,488 - 9642 mRNA_1274 0.35 0.2
811,581 - 9642 mRNA_1274 0.38 -1.1
811,658 - 9642 mRNA_1274 0.41 0.7
811,687 + 9642 mRNA_1274 0.43 -0.1
811,826 + 9642 mRNA_1274 0.48 -0.7
811,842 + 9642 mRNA_1274 0.48 -0.0
811,949 - 9642 mRNA_1274 0.53 0.0
811,991 - 9642 mRNA_1274 0.54 1.2
812,130 - 9642 mRNA_1274 0.60 0.1
812,140 - 9642 mRNA_1274 0.60 -2.4
812,147 - 9642 mRNA_1274 0.60 2.0
812,160 - 9642 mRNA_1274 0.61 -0.8
812,160 - 9642 mRNA_1274 0.61 -1.4
812,166 + 9642 mRNA_1274 0.61 -1.0
812,190 - 9642 mRNA_1274 0.62 2.6
812,579 + 9642 mRNA_1274 0.77 0.3
812,604 + 9642 mRNA_1274 0.78 0.1
812,687 - 9642 mRNA_1274 0.81 -2.8
813,176 - -0.0
813,219 - 0.9
813,470 + -0.5
813,618 - 0.6
813,672 + 0.4
813,740 + 9643 mRNA_1275 0.11 0.7
813,804 + 9643 mRNA_1275 0.14 2.0
814,057 + 9643 mRNA_1275 0.25 -0.1