Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_1180

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_1179: 9547 - K12611 DCP1B mRNA-decapping enzyme 1B, at 584015 to 586277 9547 mRNA_1180: 9548 - Hypothetical Protein, at 587058 to 592378 9548 mRNA_1181: 9549 - Hypothetical Protein, at 592662 to 593327 9549

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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586,158 - -0.3
586,314 + -1.5
586,447 - 0.5
586,560 - 0.4
586,715 - 0.8
586,741 + 1.8
586,838 + -0.2
586,842 + 0.1
586,899 - -0.7
586,946 - -0.2
587,608 - 9548 mRNA_1180 0.10 0.2
587,927 + 9548 mRNA_1180 0.16 2.5
588,040 - 9548 mRNA_1180 0.18 -1.3
588,045 + 9548 mRNA_1180 0.19 0.3
588,064 - 9548 mRNA_1180 0.19 0.3
588,177 + 9548 mRNA_1180 0.21 1.0
588,319 - 9548 mRNA_1180 0.24 0.5
588,620 + 9548 mRNA_1180 0.29 -1.7
588,868 + 9548 mRNA_1180 0.34 0.9
588,898 + 9548 mRNA_1180 0.35 1.7
589,038 - 9548 mRNA_1180 0.37 2.1
589,062 - 9548 mRNA_1180 0.38 -0.3
589,072 + 9548 mRNA_1180 0.38 1.1
589,184 - 9548 mRNA_1180 0.40 0.4
589,213 + 9548 mRNA_1180 0.40 0.6
589,253 + 9548 mRNA_1180 0.41 0.0
589,330 - 9548 mRNA_1180 0.43 0.7
589,436 - 9548 mRNA_1180 0.45 -0.7
589,468 - 9548 mRNA_1180 0.45 -0.2
589,478 + 9548 mRNA_1180 0.45 -0.4
589,613 + 9548 mRNA_1180 0.48 1.5
589,766 - 9548 mRNA_1180 0.51 -0.3
589,805 + 9548 mRNA_1180 0.52 1.7
589,805 + 9548 mRNA_1180 0.52 0.6
589,903 - 9548 mRNA_1180 0.53 -0.2
589,910 + 9548 mRNA_1180 0.54 -1.1
590,080 + 9548 mRNA_1180 0.57 -0.4
590,299 - 9548 mRNA_1180 0.61 0.6
590,349 - 9548 mRNA_1180 0.62 0.3
590,668 + 9548 mRNA_1180 0.68 1.5
590,805 - 9548 mRNA_1180 0.70 1.1
591,012 + 9548 mRNA_1180 0.74 -0.8
591,201 + 9548 mRNA_1180 0.78 0.6
591,661 - 9548 mRNA_1180 0.87 -0.4
591,715 - 9548 mRNA_1180 0.88 -0.5
591,791 + 9548 mRNA_1180 0.89 1.2
591,922 - -1.1
591,923 + -0.3
591,934 - -0.3
592,120 + -0.7
592,121 + 0.8
592,124 - -0.5
592,209 + 1.0
592,228 + 0.9
592,284 + -1.5
592,287 - -1.7
592,289 + 1.8
592,653 + -1.6
592,702 - -0.0
592,835 - 9549 mRNA_1181 0.26 -0.4
593,119 - 9549 mRNA_1181 0.69 -2.6
593,361 + 3.1