Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_930

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_930: 9298 - K00861 RFK, FMN1 riboflavin kinase, at 359 to 1600 9298 mRNA_931: 9299 - K14794 RRP12 ribosomal RNA-processing protein 12, at 1838 to 6021 9299

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1 + 0.4
1 + 0.9
1 + 0.5
1 + 1.2
1 + 0.1
2 + 0.5
2 + 0.0
5 + 0.3
18 + 0.2
30 + 1.4
37 + 0.1
37 + 2.1
41 + -0.0
42 + 0.1
44 + -0.2
49 + 0.0
49 + 1.5
50 + 0.7
54 + 0.6
58 - 0.5
60 - 0.6
60 + 0.4
60 - -0.6
61 - 1.8
61 + -0.5
63 + 0.7
63 + 0.6
63 + -0.9
63 + 1.0
63 + 1.1
63 + 0.3
64 + -0.0
66 - -0.8
66 + -0.5
70 + 0.8
70 + 0.2
70 - 0.5
71 + -1.5
73 + 0.4
75 - -1.4
77 - -1.9
78 + 2.2
78 - -1.7
78 + -0.9
78 + -0.3
78 + -0.0
78 + -0.1
78 + 0.7
78 + 0.5
78 + -1.7
79 + -0.3
81 - 0.5
81 - 2.7
82 + 1.5
85 + 0.5
104 + 0.8
126 + -0.3
126 + -1.3
128 - 0.8
135 + 2.0
142 + 0.2
150 + 1.6
154 + 0.2
157 + 0.3
171 - -1.1
171 + -0.5
172 + 0.7
172 + 1.4
175 - 1.3
176 - 1.3
177 - 2.2
177 - 0.3
191 - 0.7
192 + 1.3
192 + -0.1
192 + 0.2
193 + 0.6
193 + -0.9
193 + 0.6
198 - -0.2
218 + -0.3
225 + -0.2
235 + 0.8
242 + 0.8
263 - -1.0
293 + 0.7
303 + 0.6
333 - -0.1
339 - -0.2
348 + 1.1
349 + -0.4
377 - 1.0
381 - 0.7
469 + -2.6
487 - 9298 mRNA_930 0.10 1.2
722 + 9298 mRNA_930 0.29 -1.6
1,641 - 1.7
1,656 - -0.7
1,768 - -1.3
1,778 - -0.9
1,794 + -0.2