Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_907

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_906: 9274 - K15791 DHKTD1 probable 2-oxoglutarate dehydrogenase E1 component DHKTD1, at 2166702 to 2170290 9274 mRNA_907: 9275 - K20523 SH3YL1 SH3 domain-containing YSC84-like protein 1, at 2170887 to 2172443 9275 mRNA_908: 9276 - Hypothetical Protein, at 2172531 to 2173610 9276

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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2,169,972 - 0.1
2,170,162 + -0.8
2,170,361 + 0.3
2,170,372 + 0.1
2,170,377 - -0.7
2,170,379 - 0.4
2,170,388 - -0.1
2,170,675 - 0.2
2,170,680 + 0.2
2,170,799 - 0.3
2,170,803 + 0.7
2,170,811 - 0.2
2,170,832 - 1.0
2,171,012 + 0.7
2,171,122 - 9275 mRNA_907 0.15 0.0
2,171,282 + 9275 mRNA_907 0.25 1.2
2,171,376 + 9275 mRNA_907 0.31 0.4
2,171,457 - 9275 mRNA_907 0.37 2.6
2,171,834 - 9275 mRNA_907 0.61 -0.5
2,171,872 + 9275 mRNA_907 0.63 1.4
2,172,568 - 0.1
2,172,730 + 9276 mRNA_908 0.18 0.7
2,172,731 - 9276 mRNA_908 0.19 -1.6
2,172,737 + 9276 mRNA_908 0.19 0.6
2,172,740 + 9276 mRNA_908 0.19 0.2
2,172,742 - 9276 mRNA_908 0.20 0.1
2,172,746 + 9276 mRNA_908 0.20 0.9
2,172,751 - 9276 mRNA_908 0.20 1.1
2,172,763 + 9276 mRNA_908 0.21 1.3
2,172,766 + 9276 mRNA_908 0.22 -1.3
2,172,772 + 9276 mRNA_908 0.22 0.9
2,172,780 + 9276 mRNA_908 0.23 0.9
2,172,784 + 9276 mRNA_908 0.23 0.7
2,172,786 - 9276 mRNA_908 0.24 0.0
2,172,787 - 9276 mRNA_908 0.24 -0.2
2,172,788 + 9276 mRNA_908 0.24 0.1
2,172,794 + 9276 mRNA_908 0.24 0.9
2,172,801 + 9276 mRNA_908 0.25 0.3
2,172,918 - 9276 mRNA_908 0.36 1.3
2,172,934 - 9276 mRNA_908 0.37 0.2
2,173,039 - 9276 mRNA_908 0.47 0.5
2,173,079 + 9276 mRNA_908 0.51 0.4
2,173,346 - 9276 mRNA_908 0.75 1.3
2,173,362 - 9276 mRNA_908 0.77 0.2