Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_790

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_789: 9157 - K14459 HEX hexosaminidase, at 1873668 to 1877392 9157 mRNA_790: 9158 - HMMPfam-C2 domain-PF00168,ProSiteProfiles-C2 domain profile.-PS50004,SMART-Protein kinase C conserved region 2 (CalB)-SM00239,SUPERFAMILY--SSF49562, at 1877966 to 1880180 9158 mRNA_791: 9159 - HMMPfam-Svf1-like-PF08622,SUPERFAMILY--SSF159245, at 1880384 to 1881933 9159

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,877,135 + 0.6
1,877,254 + -0.3
1,877,291 + 0.1
1,877,399 + 0.3
1,877,452 - -1.1
1,877,718 - 0.4
1,877,740 + 0.5
1,877,874 - 0.1
1,877,879 + 0.3
1,877,880 + 0.9
1,877,880 + 0.1
1,877,889 + 0.5
1,879,038 - 9158 mRNA_790 0.48 -2.0
1,879,496 + 9158 mRNA_790 0.69 0.4
1,879,753 + 9158 mRNA_790 0.81 -1.9
1,879,787 + 9158 mRNA_790 0.82 1.1
1,879,791 + 9158 mRNA_790 0.82 0.9
1,880,359 - 1.4