Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_634

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_633: 9001 - K14575 AFG2, DRG1, SPATA5 AAA family ATPase, at 1517920 to 1520918 9001 mRNA_634: 9002 - K18932 ZDHHC palmitoyltransferase, at 1521013 to 1522610 9002

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,521,004 + -0.5
1,521,144 + 0.7
1,521,289 - 9002 mRNA_634 0.17 -1.2
1,521,441 + 9002 mRNA_634 0.27 -0.2
1,521,595 + 9002 mRNA_634 0.36 0.4
1,521,605 + 9002 mRNA_634 0.37 0.3
1,521,731 + 9002 mRNA_634 0.45 0.6
1,522,025 - 9002 mRNA_634 0.63 -0.0
1,522,214 + 9002 mRNA_634 0.75 1.0
1,522,314 - 9002 mRNA_634 0.81 -0.2
1,522,341 - 9002 mRNA_634 0.83 -0.3
1,522,482 + 2.7
1,522,626 - 1.5
1,522,628 + 1.2
1,522,643 + 0.6
1,522,674 + -0.7
1,522,720 + -2.3
1,522,780 + 1.9
1,522,781 + 0.2
1,522,908 - -0.2
1,522,914 - -0.5
1,522,925 - 1.8
1,522,929 - 0.6
1,522,935 + 0.5
1,523,230 + -0.1
1,523,365 - -0.5