Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_583

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_582: 8950 - K02876 RP-L15, MRPL15, rplO large subunit ribosomal protein L15, at 1392598 to 1393775 8950 mRNA_583: 8951 - HMMPfam-Protein of Unknown function (DUF1690)-PF07956, at 1393876 to 1394660 8951 mRNA_584: 8952 - K01259 pip proline iminopeptidase, at 1394806 to 1396431 8952

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,393,819 + -1.1
1,393,822 - -0.6
1,393,839 + 0.3
1,393,848 - 1.6
1,393,863 - -0.5
1,393,971 - 8951 mRNA_583 0.12 0.4
1,393,981 + 8951 mRNA_583 0.13 0.3
1,393,982 - 8951 mRNA_583 0.14 0.1
1,394,020 - 8951 mRNA_583 0.18 -0.2
1,394,120 - 8951 mRNA_583 0.31 0.5
1,394,397 - 8951 mRNA_583 0.66 -0.7
1,394,541 + 8951 mRNA_583 0.85 -0.0
1,394,569 - 8951 mRNA_583 0.88 0.1
1,394,799 + 0.2
1,394,824 - -0.5
1,395,004 + 8952 mRNA_584 0.12 0.4
1,395,188 + 8952 mRNA_584 0.23 3.6
1,395,251 + 8952 mRNA_584 0.27 0.3