Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_442

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_441: 8809 - K13989 DERL2_3 Derlin-2/3, at 1022824 to 1024299 8809 mRNA_442: 8810 - K11835 USP4_11_15, UBP12 ubiquitin carboxyl-terminal hydrolase 4/11/15, at 1024579 to 1029147 8810 mRNA_443: 8811 - KOG2742 Predicted oxidoreductase, at 1029373 to 1030485 8811

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,024,043 + 8809 mRNA_441 0.83 -1.4
1,024,184 - -1.8
1,024,335 + -0.9
1,024,448 - 0.9
1,024,450 - -0.1
1,024,481 + -0.5
1,024,485 - -0.5
1,024,832 + 0.6
1,024,951 + 0.0
1,025,538 - 8810 mRNA_442 0.21 -1.2
1,026,133 + 8810 mRNA_442 0.34 0.4
1,026,676 - 8810 mRNA_442 0.46 -1.0
1,027,133 - 8810 mRNA_442 0.56 2.1
1,027,305 + 8810 mRNA_442 0.60 -0.0
1,027,418 - 8810 mRNA_442 0.62 1.4
1,028,084 - 8810 mRNA_442 0.77 0.6
1,028,132 + 8810 mRNA_442 0.78 3.7
1,028,156 + 8810 mRNA_442 0.78 2.4
1,028,265 - 8810 mRNA_442 0.81 -0.4
1,028,362 + 8810 mRNA_442 0.83 0.8
1,028,753 + -0.5
1,029,152 - 0.7
1,029,165 - 0.8
1,029,182 - 0.1
1,029,192 + -0.3
1,029,201 - 1.9
1,029,434 - 1.9
1,029,475 - -0.8
1,029,780 + 8811 mRNA_443 0.37 1.1
1,029,920 + 8811 mRNA_443 0.49 2.2