Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_260

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_259: 8627 - HMMPfam-Domain of unknown function (DUF1771)-PF08590,ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103,ProSiteProfiles-Smr domain profile.-PS50828,SMART-zinc finger-SM00356, at 622490 to 625658 8627 mRNA_260: 8628 - KOG2534 DNA polymerase IV (family X), at 625910 to 627593 8628 mRNA_261: 8629 - KOG1745 Histones H3 and H4, at 627613 to 628433 8629

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
625,752 + -0.2
625,771 - 0.1
625,779 - -0.0
625,784 - 0.1
625,785 + -0.1
625,826 - 0.8
625,835 - 0.6
625,835 + 0.7
625,842 - 0.1
625,847 - -0.8
625,847 + 0.4
625,851 - -0.1
625,858 - -0.4
625,858 - -1.9
625,884 + 0.5
626,007 - 1.4
626,579 + 8628 mRNA_260 0.40 -0.7
626,704 + 8628 mRNA_260 0.47 -0.2
626,748 - 8628 mRNA_260 0.50 -1.0
626,888 - 8628 mRNA_260 0.58 0.7
627,058 + 8628 mRNA_260 0.68 0.3
627,061 + 8628 mRNA_260 0.68 1.0
627,208 + 8628 mRNA_260 0.77 0.2
627,215 - 8628 mRNA_260 0.77 0.3
627,500 + 1.6
627,547 + -1.6
627,596 - -0.5
627,680 - 0.1
627,924 + 8629 mRNA_261 0.38 -0.0
628,067 + 8629 mRNA_261 0.55 1.7
628,194 - 8629 mRNA_261 0.71 -0.0
628,201 + 8629 mRNA_261 0.72 -1.8
628,357 - 2.6