Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_162

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_161: 8529 - KOG1727 Microtubule-binding protein (translationally controlled tumor protein), at 399773 to 400854 8529 mRNA_162: 8530 - BLAST NADH dehydrogenase [ubiquinone] 1 alpha subcomplex su..., at 401367 to 403016 8530 mRNA_163: 8531 - Hypothetical Protein, at 403276 to 404295 8531

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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400,978 - 0.5
400,978 - 0.7
400,999 - 0.4
401,000 - 2.6
401,014 + 1.0
401,024 - -0.2
401,028 + -0.1
401,032 - -0.8
401,040 - -0.5
401,040 - -0.3
401,047 - 1.6
401,056 + -1.0
401,056 + -0.2
401,058 + -0.3
401,058 + -0.4
401,153 + -0.4
401,188 + 1.5
401,188 - 1.9
401,202 - 1.2
401,214 + 1.2
401,338 - 0.9
401,361 + -0.8
401,385 + -0.8
401,500 + -0.6
401,512 - -1.2
401,514 + 0.7
401,611 - 8530 mRNA_162 0.15 1.2
401,635 + 8530 mRNA_162 0.16 0.4
401,935 - 8530 mRNA_162 0.34 -1.3
402,758 + 8530 mRNA_162 0.84 0.5
403,510 - 8531 mRNA_163 0.23 -0.2
403,520 - 8531 mRNA_163 0.24 0.4
403,681 + 8531 mRNA_163 0.40 -0.3
403,868 + 8531 mRNA_163 0.58 -0.6
403,941 - 8531 mRNA_163 0.65 1.4
403,988 - 8531 mRNA_163 0.70 0.3