Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_114

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_112: 8480 - K10899 RECQL ATP-dependent DNA helicase Q1, at 264157 to 266973 8480 mRNA_113: 8481 - KOG0209 P-type ATPase, at 267088 to 267405 8481 mRNA_114: 8482 - K10862 TDP1 tyrosyl-DNA phosphodiesterase 1, at 267754 to 270066 8482 mRNA_115: 8483 - K14950 ATP13A1 cation-transporting ATPase 13A1, at 270395 to 274744 8483

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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266,777 + -0.8
266,894 - 1.9
266,900 + 0.6
266,900 + 0.0
267,130 - 8481 mRNA_113 0.13 2.7
267,140 - 8481 mRNA_113 0.16 2.0
267,314 - 8481 mRNA_113 0.71 -0.3
267,332 + 8481 mRNA_113 0.77 0.6
267,340 - 8481 mRNA_113 0.79 -0.0
267,482 + 0.5
267,499 + 0.4
267,885 + 0.4
267,886 - -0.1
268,053 - 8482 mRNA_114 0.13 0.6
268,059 + 8482 mRNA_114 0.13 0.2
268,554 + 8482 mRNA_114 0.35 0.5
268,613 - 8482 mRNA_114 0.37 -0.1
268,637 - 8482 mRNA_114 0.38 -1.1
268,643 + 8482 mRNA_114 0.38 -0.4
268,648 - 8482 mRNA_114 0.39 -0.4
268,779 - 8482 mRNA_114 0.44 -0.1
268,785 + 8482 mRNA_114 0.45 -0.1
268,794 + 8482 mRNA_114 0.45 1.2
268,903 - 8482 mRNA_114 0.50 0.3
268,918 + 8482 mRNA_114 0.50 1.3
269,061 - 8482 mRNA_114 0.57 -0.1
269,235 - 8482 mRNA_114 0.64 0.2
269,243 - 8482 mRNA_114 0.64 2.0
269,395 + 8482 mRNA_114 0.71 0.9
269,467 + 8482 mRNA_114 0.74 -2.3
269,797 - 8482 mRNA_114 0.88 -1.0
269,885 - -0.6
269,917 - 2.0
270,081 - 0.2
270,083 - 1.1
270,230 + 2.1
270,245 + 0.6
270,248 + 1.4
270,256 + -0.3