Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_89

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_89: 8457 - HMMPfam-Polysaccharide deacetylase-PF01522,ProSiteProfiles-NodB homology domain profile.-PS51677,SUPERFAMILY--SSF88713, at 213359 to 214966 8457 mRNA_90: 8458 - Hypothetical Protein, at 215330 to 215955 8458

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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212,375 - -0.2
212,410 - 0.3
212,494 + 0.3
212,502 - 1.0
212,504 - 0.5
212,508 + 0.1
212,512 - -0.4
212,524 + -0.0
212,544 - 1.0
212,623 + -0.4
212,623 + 0.0
212,641 + 0.4
212,645 + 0.5
212,652 + 0.4
212,652 - 0.4
212,658 + 0.3
212,663 - 1.5
212,669 + 0.5
212,670 - 0.7
212,677 - 1.0
212,695 - 1.1
212,695 + 0.5
212,801 - 0.5
212,807 + 1.5
212,811 + -0.6
212,821 + -1.5
212,835 - 0.7
212,844 - -0.6
212,853 + 1.4
212,855 + -0.3
212,873 + -0.8
212,875 - -0.2
212,880 + 2.1
212,880 + 0.2
212,900 - -2.7
212,901 - 0.5
212,906 - -0.2
212,933 - 0.4
212,940 - 3.6
212,950 - -1.3
212,961 - 0.4
212,983 + -0.1
213,005 - 1.4
213,025 - -0.2
213,029 + -0.1
213,039 - 0.5
213,043 + 0.0
213,053 + -1.0
213,059 - 1.6
213,066 - 1.0
213,067 + 1.0
213,073 + -0.3
213,074 + 0.1
213,099 + -0.3
213,110 - 1.7
213,112 + 1.1
213,118 + 0.7
213,122 + 0.9
213,125 - 1.7
213,126 + 0.8
213,126 + -0.5
213,127 - 0.3
213,139 + 0.3
213,141 - 2.0
213,156 + 0.5
213,158 + 0.2
213,159 + -1.1
213,165 - -2.5
213,168 - -1.4
213,175 - -1.2
213,292 - -0.6
213,334 + 0.0
213,340 - 0.2
213,345 + -2.2
213,361 + -0.5
213,367 + 0.5
213,459 - 0.1
213,460 + 0.9
213,466 - 0.6
213,475 + -0.3
213,484 + 1.6
213,507 - 0.0
213,510 + -0.3
213,679 - 8457 mRNA_89 0.20 -2.6
213,762 - 8457 mRNA_89 0.25 0.2
213,793 + 8457 mRNA_89 0.27 0.3
214,219 + 8457 mRNA_89 0.53 0.5
214,384 + 8457 mRNA_89 0.64 0.1
214,528 - 8457 mRNA_89 0.73 0.7
214,647 - 8457 mRNA_89 0.80 -0.6
215,100 + -0.4
215,561 - 8458 mRNA_90 0.37 -0.7
215,827 + 8458 mRNA_90 0.79 0.1
215,848 + 8458 mRNA_90 0.83 0.9
215,849 - 8458 mRNA_90 0.83 1.3