Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_48

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_47: 8415 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 114589 to 115599 8415 mRNA_48: 8416 - HMMPfam-Serine hydrolase (FSH1)-PF03959,SUPERFAMILY--SSF53474, at 116348 to 117395 8416 mRNA_49: 8417 - K03133 TAF9B, TAF9 transcription initiation factor TFIID subunit 9B, at 117701 to 118562 8417

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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115,372 - 8415 mRNA_47 0.77 0.3
115,609 - -0.3
115,729 + 2.3
115,808 - -0.5
115,835 + 0.1
115,866 - -0.1
115,920 - -0.6
115,921 + -1.3
115,922 - 1.1
115,931 + 0.3
115,945 + 0.8
115,954 - 0.2
115,969 + 0.9
115,972 + -1.5
115,980 - -1.4
115,988 + 0.3
115,994 + -1.4
115,995 - -0.4
115,998 + 0.4
116,003 + 0.4
116,030 + 0.5
116,037 - 0.4
116,040 + -0.7
116,047 - 0.3
116,052 + 0.9
116,081 + -0.6
116,081 + -0.5
116,154 - -0.0
116,154 + 0.1
116,186 + -0.3
116,192 - -1.0
116,198 + 1.4
116,199 + 1.0
116,231 - -0.3
116,235 + -0.6
116,242 + 0.7
116,270 + 0.1
116,376 - 1.6
116,402 - 0.7
116,467 - 8416 mRNA_48 0.11 0.6
116,564 - 8416 mRNA_48 0.21 -0.5
116,945 + 8416 mRNA_48 0.57 -1.3
117,414 + 1.3
117,652 + -0.1
117,781 - 0.5
117,822 - 8417 mRNA_49 0.14 0.2