Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8476

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8475: 16843 - K03113 EIF1, SUI1 translation initiation factor 1, at 1316570 to 1317509 16843 mRNA_8476: 16844 - BLAST glycoside hydrolase family 43 protein [Mycena chlorop..., at 1318401 to 1318799 16844 mRNA_8477: 16845 - KOG4405 GDP dissociation inhibitor, at 1319063 to 1321156 16845

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,317,575 + -0.0
1,317,700 - 1.1
1,317,713 + 0.3
1,317,714 - 0.8
1,317,872 - 0.6
1,317,876 - 0.6
1,317,896 + 0.5
1,317,983 - -0.2
1,317,999 + 0.6
1,318,023 + 1.0
1,318,088 + 0.4
1,318,146 - 1.8
1,318,149 + 1.8
1,318,172 - 0.9
1,318,172 - 0.9
1,318,200 - 1.4
1,318,226 - 0.5
1,318,342 + 0.8
1,318,404 + -0.9
1,318,522 + 16844 mRNA_8476 0.30 1.5
1,318,683 + 16844 mRNA_8476 0.71 0.6
1,318,804 + 2.2
1,318,933 + 2.6
1,318,933 + -0.1