Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8432

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8431: 16799 - K15105 SLC25A12_13, AGC solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13, at 1212231 to 1215205 16799 mRNA_8432: 16800 - Hypothetical Protein, at 1215314 to 1218685 16800 mRNA_8433: 16801 - SUPERFAMILY--SSF54909, at 1219119 to 1219808 16801

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,214,403 + 16799 mRNA_8431 0.73 -1.5
1,214,834 - 16799 mRNA_8431 0.87 0.4
1,214,989 - -0.6
1,215,013 - 2.7
1,215,033 - 0.4
1,215,146 + -1.9
1,215,154 - 0.3
1,215,165 + -0.8
1,215,172 + 1.7
1,215,295 - 1.7
1,215,302 - 1.4
1,215,303 - 1.3
1,215,305 + 1.0
1,215,344 + 1.5
1,215,433 + 0.0
1,215,478 + 3.6
1,215,495 + 0.0
1,215,495 + 1.7
1,215,623 - -0.3
1,215,790 - 16800 mRNA_8432 0.14 0.8
1,216,077 - 16800 mRNA_8432 0.23 1.5
1,216,085 - 16800 mRNA_8432 0.23 0.3
1,216,113 - 16800 mRNA_8432 0.24 0.1
1,216,177 - 16800 mRNA_8432 0.26 -0.3
1,216,404 - 16800 mRNA_8432 0.32 -0.3
1,216,776 - 16800 mRNA_8432 0.43 0.1
1,216,838 + 16800 mRNA_8432 0.45 -0.1
1,216,955 - 16800 mRNA_8432 0.49 0.3
1,216,966 + 16800 mRNA_8432 0.49 0.6
1,216,979 + 16800 mRNA_8432 0.49 0.2
1,217,110 - 16800 mRNA_8432 0.53 -0.8
1,217,283 - 16800 mRNA_8432 0.58 -0.2
1,217,417 - 16800 mRNA_8432 0.62 -0.2
1,217,437 + 16800 mRNA_8432 0.63 -0.2
1,217,452 + 16800 mRNA_8432 0.63 -0.7
1,217,547 - 16800 mRNA_8432 0.66 0.8
1,217,570 + 16800 mRNA_8432 0.67 1.1
1,217,602 + 16800 mRNA_8432 0.68 0.2
1,217,604 - 16800 mRNA_8432 0.68 0.0
1,217,719 + 16800 mRNA_8432 0.71 -0.2
1,217,760 - 16800 mRNA_8432 0.73 -1.0
1,218,020 + 16800 mRNA_8432 0.80 0.7
1,218,293 + 16800 mRNA_8432 0.88 1.5
1,218,594 - -0.9
1,218,848 - -0.0
1,218,866 + 0.5
1,218,872 + 0.0
1,218,883 - 0.7
1,218,895 - 0.3
1,218,899 + -0.3
1,218,925 + -0.1
1,219,029 - -0.2
1,219,034 - 2.4
1,219,094 + 0.7
1,219,195 - 16801 mRNA_8433 0.11 0.4
1,219,328 + 16801 mRNA_8433 0.30 2.1
1,219,459 + 16801 mRNA_8433 0.49 -1.2
1,219,499 + 16801 mRNA_8433 0.55 -0.8
1,219,590 + 16801 mRNA_8433 0.68 -0.4
1,219,607 + 16801 mRNA_8433 0.71 1.5
1,219,632 - 16801 mRNA_8433 0.74 -0.8