Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8266

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8265: 16633 - KOG0444 Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats), at 802560 to 804214 16633 mRNA_8266: 16634 - K07297 ADIPOR adiponectin receptor, at 804995 to 806356 16634 mRNA_8267: 16635 - K01897 ACSL, fadD long-chain acyl-CoA synthetase, at 806792 to 809289 16635

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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804,098 + -0.2
804,109 - -0.1
804,115 + -0.5
804,158 - -0.1
804,158 - 0.4
804,159 + 1.7
804,161 + 1.4
804,161 + 2.4
804,167 - -0.2
804,173 + 0.0
804,179 - -1.2
804,185 - 0.1
804,188 - -0.1
804,192 + 0.1
804,211 - 0.1
804,216 + -0.4
804,221 - 0.1
804,231 - 0.5
804,235 + 0.5
804,244 - 0.8
804,318 + -0.1
804,322 + 0.0
804,323 + 0.8
804,330 + 0.2
804,338 - 0.2
804,455 - 0.5
804,494 + 0.5
804,613 + 3.0
804,634 - -0.2
804,640 - 1.1
804,645 + -0.0
804,658 - -0.4
804,660 - 1.4
804,674 - -0.5
804,701 - 0.1
804,845 - -0.1
804,870 + -1.2
804,891 - 1.3
804,923 - 0.8
805,029 + -0.5
805,068 + -0.6
805,522 - 16634 mRNA_8266 0.39 -0.1
805,938 + 16634 mRNA_8266 0.69 -1.7
806,226 - 2.4
806,271 + 2.1
806,382 - 0.5
806,390 - 0.1
806,508 - 0.2
806,526 + -2.3
806,526 - -0.1
806,528 - 1.0
806,530 - 1.2
806,530 - -0.3
806,539 - -0.1
806,550 - -1.3
806,554 - 0.6
806,557 + -1.3
806,560 + 2.6
806,589 - 1.0
806,639 - 0.1
806,640 + 0.2
806,648 - 0.8
806,691 - -0.1
806,718 + 0.7
806,730 + 0.6
806,969 - -0.6
806,970 + 0.1
806,999 - -0.6
807,168 - 16635 mRNA_8267 0.15 -0.2