Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8043

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8042: 16410 - K17408 DAP3, MRPS29 small subunit ribosomal protein S29, at 288968 to 290792 16410 mRNA_8043: 16411 - K15283 SLC35E1 solute carrier family 35, member E1, at 291004 to 293289 16411 mRNA_8044: 16412 - KOG4520 Predicted coiled-coil protein, at 293561 to 294571 16412

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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291,310 - 16411 mRNA_8043 0.13 0.1
292,009 + 16411 mRNA_8043 0.44 1.1
292,390 - 16411 mRNA_8043 0.61 -0.9
292,420 - 16411 mRNA_8043 0.62 0.8
292,462 - 16411 mRNA_8043 0.64 -0.3
292,547 - 16411 mRNA_8043 0.67 1.2
292,608 + 16411 mRNA_8043 0.70 0.7
292,620 - 16411 mRNA_8043 0.71 0.4
293,047 - 16411 mRNA_8043 0.89 2.2
293,167 + 0.9
293,179 - 1.2
293,329 - -0.0
293,331 + 0.2
293,468 + 0.2
293,492 + -0.6
293,495 - 0.7
293,522 - 0.7
293,643 - -2.2
293,645 - 0.9
293,660 + 1.9
293,816 + 16412 mRNA_8044 0.25 1.3