Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_8015

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_8014: 16382 - HMMPfam-Protein of unknown function (DUF1769)-PF08588, at 213638 to 214851 16382 mRNA_8015: 16383 - HMMPfam-MYND finger-PF01753,SUPERFAMILY--SSF144232, at 215153 to 216105 16383 mRNA_8016: 16384 - K11968 ARIH1 ariadne-1, at 216301 to 218518 16384

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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214,354 - 16382 mRNA_8014 0.59 2.0
214,533 - 16382 mRNA_8014 0.74 0.8
214,791 - 0.3
214,796 + 0.5
214,944 + 1.0
215,235 - -0.1
215,263 - 16383 mRNA_8015 0.12 0.1
215,308 - 16383 mRNA_8015 0.16 -1.6
215,312 - 16383 mRNA_8015 0.17 0.4
215,491 + 16383 mRNA_8015 0.35 0.8
215,519 - 16383 mRNA_8015 0.38 0.2
215,539 + 16383 mRNA_8015 0.41 0.3
215,540 - 16383 mRNA_8015 0.41 1.4
215,548 - 16383 mRNA_8015 0.41 -0.7
215,548 + 16383 mRNA_8015 0.41 -0.2
215,558 + 16383 mRNA_8015 0.42 -0.3
215,582 + 16383 mRNA_8015 0.45 -0.5
215,598 - 16383 mRNA_8015 0.47 0.6
215,620 - 16383 mRNA_8015 0.49 1.4
215,661 + 16383 mRNA_8015 0.53 0.5
215,667 - 16383 mRNA_8015 0.54 -0.1
215,671 - 16383 mRNA_8015 0.54 0.6
215,686 + 16383 mRNA_8015 0.56 2.8
215,692 + 16383 mRNA_8015 0.57 0.2
215,834 - 16383 mRNA_8015 0.71 0.4
215,948 + 16383 mRNA_8015 0.83 1.3
215,972 - 16383 mRNA_8015 0.86 0.5
215,976 + 16383 mRNA_8015 0.86 3.0
216,105 + -0.0
216,228 + 0.3
216,265 - -1.5
216,282 - 1.2
216,292 + -1.2