Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7905

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7904: 16272 - Hypothetical Protein, at 1342830 to 1343789 16272 mRNA_7905: 16273 - K00147 proA glutamate-5-semialdehyde dehydrogenase, at 1344206 to 1345846 16273 mRNA_7906: 16274 - BLAST Protein of unknown function [Pyronema omphalodes CBS ..., at 1346644 to 1348770 16274

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,343,274 - 16272 mRNA_7904 0.46 0.6
1,343,565 - 16272 mRNA_7904 0.77 0.0
1,343,571 - 16272 mRNA_7904 0.77 0.3
1,343,669 + 16272 mRNA_7904 0.87 0.2
1,343,705 - 0.4
1,343,725 + 0.0
1,343,730 + 0.7
1,343,817 - -0.7
1,343,820 + 1.1
1,343,845 + -0.0
1,343,847 - -0.1
1,343,869 + -0.5
1,343,901 - -0.2
1,344,107 - -0.9
1,344,120 - 0.4
1,344,122 - 0.9
1,344,125 + -0.9
1,344,128 - 0.6
1,344,138 - 1.7
1,344,146 - 0.0
1,344,163 - 0.8
1,344,167 + 0.9
1,344,614 - 16273 mRNA_7905 0.25 -2.4
1,344,846 + 16273 mRNA_7905 0.39 -0.4
1,345,846 + -0.3
1,345,851 + 0.1
1,345,851 - -0.8
1,345,864 - -0.3
1,345,882 + -0.1
1,345,887 - 0.5
1,345,907 - 0.4
1,345,923 + 1.3
1,345,982 - 0.1
1,345,984 - -1.0
1,345,995 - -0.0
1,346,003 + 1.0
1,346,019 + 2.1
1,346,022 + 0.9
1,346,089 - -1.1
1,346,146 + -0.0
1,346,162 + 0.2
1,346,188 + -0.7
1,346,266 - 0.1
1,346,281 - -0.8
1,346,282 - 0.5
1,346,301 + 0.6
1,346,302 + 1.7
1,346,323 - -0.3
1,346,335 + 0.5
1,346,360 - -1.1
1,346,379 - -0.5
1,346,400 + -0.4
1,346,410 + 1.4
1,346,460 - 1.4
1,346,596 + 0.2
1,346,597 - -0.3
1,346,601 + -1.7
1,346,608 + -0.2
1,346,612 - 0.1
1,346,762 + 0.2
1,346,775 + 0.3