Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7819

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7818: 16186 - K10865 MRE11 double-strand break repair protein MRE11, at 1138694 to 1141964 16186 mRNA_7819: 16187 - K15015 SLC32A, VGAT solute carrier family 32 (vesicular inhibitory amino acid transporter), at 1142212 to 1144699 16187 mRNA_7820: 16188 - Hypothetical Protein, at 1144950 to 1145793 16188

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,141,732 + -1.9
1,141,973 - -0.1
1,141,976 - 0.4
1,141,977 + -0.2
1,141,988 - 0.9
1,142,070 - 1.5
1,142,079 + 2.0
1,142,212 - 1.8
1,142,397 + 0.8
1,142,507 + 16187 mRNA_7819 0.12 -1.9
1,142,529 + 16187 mRNA_7819 0.13 -0.8
1,142,943 + 16187 mRNA_7819 0.29 0.1
1,142,954 + 16187 mRNA_7819 0.30 -0.9
1,142,956 - 16187 mRNA_7819 0.30 -0.4
1,142,956 - 16187 mRNA_7819 0.30 0.1
1,142,960 - 16187 mRNA_7819 0.30 -0.9
1,142,977 - 16187 mRNA_7819 0.31 0.8
1,143,110 + 16187 mRNA_7819 0.36 -0.1
1,143,254 + 16187 mRNA_7819 0.42 0.3
1,143,761 - 16187 mRNA_7819 0.62 -0.3
1,144,338 + 16187 mRNA_7819 0.85 1.9
1,144,770 + 1.2
1,144,814 - -0.0
1,145,126 + 16188 mRNA_7820 0.21 0.7
1,145,249 + 16188 mRNA_7820 0.35 0.2
1,145,260 - 16188 mRNA_7820 0.37 -0.7
1,145,390 + 16188 mRNA_7820 0.52 0.9
1,145,399 - 16188 mRNA_7820 0.53 0.4