Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7708

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7707: 16075 - HMMPfam-PAZ domain-PF02170,HMMPfam-Piwi domain-PF02171,HMMPfam-Domain of unknown function (DUF1785)-PF08699,ProSiteProfiles-PAZ domain profile.-PS50821,ProSiteProfiles-Piwi domain profile.-PS50822,SMART--SM00950,SUPERFAMILY--SSF101690,SUPERFAMILY--SSF53098, at 895894 to 899712 16075 mRNA_7708: 16076 - Hypothetical Protein, at 900056 to 901517 16076 mRNA_7709: 16077 - K19877 CHS5 chitin biosynthesis protein CHS5, at 902207 to 904253 16077

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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899,295 - 16075 mRNA_7707 0.89 -1.8
899,357 - -1.3
899,381 + 0.6
899,460 - 0.7
899,612 - 0.6
899,804 + 0.9
899,867 + -0.8
899,889 - 1.7
900,081 - 0.1
900,103 + 0.8
900,929 + 16076 mRNA_7708 0.60 0.3
901,046 + 16076 mRNA_7708 0.68 1.1
901,126 + 16076 mRNA_7708 0.73 0.2
901,471 + 0.3
901,486 + 1.0
901,504 + 0.5
901,505 + -0.1
901,509 + -0.2
901,509 + -0.2
901,522 - 0.3
901,524 + -0.7
901,544 - 0.2
901,547 + 0.0
901,607 + 1.8
901,617 - 0.3
901,635 - 0.6
901,668 - 0.4
901,669 - -2.3
901,677 - -0.7
901,680 - -0.4
901,683 + 0.4
901,694 + 2.0
901,695 - -0.1
901,695 + 1.2
901,696 - -0.6
901,697 - 0.5
901,699 - 0.9
901,705 - 0.8
901,735 - 0.5
901,736 + 1.2
901,737 - -1.1
901,738 + 0.9
901,738 + 1.6
901,738 + 1.7
901,739 + 0.5
901,743 - 0.8
901,749 - 0.5
901,750 - 0.6
901,757 + 0.7
901,776 - 0.5
901,778 + 0.6
901,781 - 0.2
901,782 + 0.0
901,787 - -0.9
901,787 + -0.3
901,800 + 0.7
901,802 - 0.3
901,803 + 2.5
901,813 + 1.4
901,815 + -0.3
901,820 - 0.7
901,828 - 2.5
901,854 - -1.0
901,860 - 0.6
901,862 - -0.0
901,866 - 0.2
901,888 + -0.8
901,925 - -0.1
901,946 - 0.3
901,959 - 0.9
901,962 + -0.6
901,962 - -0.3
901,964 + 1.0
901,965 - 0.3
901,971 + 0.1
901,977 + 0.7
901,991 + 0.6
901,992 - -0.9
902,011 + -0.3
902,100 - 0.5
902,102 - 1.9
902,104 + -1.0
902,156 + -0.4
902,254 - 0.3
902,398 + 0.1