Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7690

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7689: 16057 - BLAST triacylglycerol lipase [Pochonia chlamydosporia 170], at 844796 to 845727 16057 mRNA_7690: 16058 - BLAST proteophosphoglycan ppg4 [Moesziomyces aphidis DSM 70..., at 846247 to 848747 16058 mRNA_7691: 16059 - K10770 ALKBH8 alkylated DNA repair protein alkB homolog 8, at 849187 to 849939 16059

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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845,281 + 16057 mRNA_7689 0.52 -1.0
845,370 - 16057 mRNA_7689 0.62 0.6
845,373 - 16057 mRNA_7689 0.62 2.3
845,510 - 16057 mRNA_7689 0.77 3.9
845,586 + 16057 mRNA_7689 0.85 2.4
845,696 + -0.3
845,704 + 0.8
845,713 - -0.0
845,728 + 0.1
845,826 + -2.7
845,864 + -0.5
845,871 - -0.4
845,878 + 1.7
845,966 - -0.8
845,997 + -0.4
845,998 - -0.0
846,005 - 2.7
846,020 + -0.7
846,038 - 1.0
846,299 + -1.1
846,386 - 0.6
846,498 - 16058 mRNA_7690 0.10 0.5
846,666 - 16058 mRNA_7690 0.17 0.8
846,677 + 16058 mRNA_7690 0.17 0.1
846,854 - 16058 mRNA_7690 0.24 -0.1
846,854 - 16058 mRNA_7690 0.24 -0.8
846,854 - 16058 mRNA_7690 0.24 -1.2
846,870 + 16058 mRNA_7690 0.25 -0.3
846,873 + 16058 mRNA_7690 0.25 -0.9
847,023 + 16058 mRNA_7690 0.31 -1.0
847,177 + 16058 mRNA_7690 0.37 -2.4
847,183 + 16058 mRNA_7690 0.37 -0.4
847,331 + 16058 mRNA_7690 0.43 -2.2
847,641 - 16058 mRNA_7690 0.56 2.2
847,747 - 16058 mRNA_7690 0.60 -0.2
847,755 - 16058 mRNA_7690 0.60 -0.5
847,811 + 16058 mRNA_7690 0.63 0.0
847,899 + 16058 mRNA_7690 0.66 0.9
847,912 - 16058 mRNA_7690 0.67 0.3
848,233 - 16058 mRNA_7690 0.79 1.0
848,233 + 16058 mRNA_7690 0.79 -0.9
848,330 - 16058 mRNA_7690 0.83 0.2
848,336 - 16058 mRNA_7690 0.84 -0.2
848,511 - -0.1
848,515 + 0.0
848,520 - -0.9
848,631 - 0.5
848,643 + 0.8
848,652 - 0.1
848,755 + -0.0
848,786 - 0.4
848,909 + -0.6
848,936 - 0.4
848,981 + 0.6
849,129 - -0.4
849,137 - 0.2
849,242 - 1.9
849,341 - 16059 mRNA_7691 0.20 0.1
849,385 - 16059 mRNA_7691 0.26 0.4
849,394 - 16059 mRNA_7691 0.27 -0.5
849,399 - 16059 mRNA_7691 0.28 0.2
849,471 + 16059 mRNA_7691 0.38 -0.0
849,506 + 16059 mRNA_7691 0.42 -0.2
849,506 - 16059 mRNA_7691 0.42 -1.9
849,594 + 16059 mRNA_7691 0.54 -0.3