Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7598

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7597: 15965 - Hypothetical Protein, at 648262 to 649679 15965 mRNA_7598: 15966 - K01102 PDP pyruvate dehydrogenase phosphatase, at 649917 to 652257 15966 mRNA_7599: 15967 - K01900 LSC2 succinyl-CoA synthetase beta subunit, at 652530 to 654489 15967

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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649,134 - 15965 mRNA_7597 0.61 -0.6
649,274 - 15965 mRNA_7597 0.71 0.3
649,572 - -0.2
649,578 - 0.1
649,579 + -0.6
649,717 + 0.1
649,730 + 1.1
649,873 + 0.5
649,875 - 0.6
650,023 + -0.1
650,187 + 15966 mRNA_7598 0.12 -0.2
650,308 - 15966 mRNA_7598 0.17 -0.1
650,322 - 15966 mRNA_7598 0.17 1.4
650,341 + 15966 mRNA_7598 0.18 -1.2
650,353 + 15966 mRNA_7598 0.19 0.3
650,622 + 15966 mRNA_7598 0.30 0.6
650,694 - 15966 mRNA_7598 0.33 0.5
651,326 - 15966 mRNA_7598 0.60 0.7
651,381 - 15966 mRNA_7598 0.63 -0.1
651,479 + 15966 mRNA_7598 0.67 -0.6
651,612 - 15966 mRNA_7598 0.72 -1.0
651,757 + 15966 mRNA_7598 0.79 1.4
651,873 - 15966 mRNA_7598 0.84 1.6
651,910 + 15966 mRNA_7598 0.85 1.2
651,911 - 15966 mRNA_7598 0.85 -0.4
652,050 + 1.4
652,060 + 0.4
652,490 - -0.8