Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7536

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7535: 15903 - HMMPfam-Complex1_LYR-like-PF13232, at 512882 to 513517 15903 mRNA_7536: 15904 - KOG2216 Conserved coiled/coiled coil protein, at 513749 to 514681 15904 mRNA_7537: 15905 - K13524 ABAT 4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase, at 514808 to 517082 15905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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513,583 - 2.0
513,597 + 0.1
513,599 - -0.1
513,728 + 2.3
513,869 - 15904 mRNA_7536 0.13 1.3
513,873 + 15904 mRNA_7536 0.13 0.8
513,887 - 15904 mRNA_7536 0.15 1.0
514,016 + 15904 mRNA_7536 0.29 -1.5
514,688 + -1.5
514,730 + -1.1
514,746 + 1.3
514,763 - -0.5
515,048 + 15905 mRNA_7537 0.11 -0.0
515,193 + 15905 mRNA_7537 0.17 1.1
515,203 + 15905 mRNA_7537 0.17 -0.0
515,207 - 15905 mRNA_7537 0.18 0.0
515,213 - 15905 mRNA_7537 0.18 1.2
515,215 + 15905 mRNA_7537 0.18 0.7
515,259 + 15905 mRNA_7537 0.20 0.9