Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7514

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7513: 15881 - KOG3267 Uncharacterized conserved protein, at 470046 to 470823 15881 mRNA_7514: 15882 - K11757 PBRM1, PB1 protein polybromo-1, at 471027 to 473637 15882 mRNA_7515: 15883 - K07827 KRAS, KRAS2 GTPase KRas, at 473987 to 475256 15883

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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470,114 + 1.0
470,142 + 15881 mRNA_7513 0.12 1.0
470,150 - 15881 mRNA_7513 0.13 0.8
470,170 - 15881 mRNA_7513 0.16 -0.3
470,319 + 15881 mRNA_7513 0.35 0.9
470,457 + 15881 mRNA_7513 0.53 0.3
470,717 - 15881 mRNA_7513 0.86 1.1
471,032 + 0.8
471,598 + 15882 mRNA_7514 0.22 -0.5
471,619 - 15882 mRNA_7514 0.23 0.4
471,752 - 15882 mRNA_7514 0.28 0.2
471,892 - 15882 mRNA_7514 0.33 0.5
472,062 + 15882 mRNA_7514 0.40 -1.5
472,078 - 15882 mRNA_7514 0.40 -0.1
472,205 - 15882 mRNA_7514 0.45 0.3
472,208 - 15882 mRNA_7514 0.45 0.4
472,209 + 15882 mRNA_7514 0.45 0.1
472,616 - 15882 mRNA_7514 0.61 1.2
472,799 - 15882 mRNA_7514 0.68 0.8
472,927 + 15882 mRNA_7514 0.73 -0.1
472,930 - 15882 mRNA_7514 0.73 0.8
473,232 - 15882 mRNA_7514 0.84 -2.3
473,232 - 15882 mRNA_7514 0.84 1.5
473,283 - 15882 mRNA_7514 0.86 1.3
473,371 - 15882 mRNA_7514 0.90 0.2
473,380 + -0.2
473,380 + 0.3
473,402 + -0.2
473,403 + 0.3
473,405 + -0.1
473,663 - 0.4
473,669 + 1.3
473,673 - 0.2
473,679 - 0.4
473,758 + 0.1
473,856 - 0.5
473,907 - 0.5
474,014 + -0.3
474,017 + 0.7
474,151 - 15883 mRNA_7515 0.13 0.5
474,161 + 15883 mRNA_7515 0.14 0.5
474,172 - 15883 mRNA_7515 0.15 1.1
474,420 - 15883 mRNA_7515 0.34 1.2
474,497 + 15883 mRNA_7515 0.40 0.4
474,498 + 15883 mRNA_7515 0.40 0.8
474,590 + 15883 mRNA_7515 0.47 0.6
474,617 - 15883 mRNA_7515 0.50 3.0
474,632 - 15883 mRNA_7515 0.51 0.9