Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7409

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7408: 15776 - K18422 MOV10 helicase MOV-10, at 204696 to 207946 15776 mRNA_7409: 15777 - HMMPfam-Nucleoporin subcomplex protein binding to Pom34-PF10487, at 208136 to 214432 15777 mRNA_7410: 15778 - BLAST capsular associated protein [Coprinopsis cinerea ..., at 214595 to 216194 15778

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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207,259 - 15776 mRNA_7408 0.79 -0.4
207,303 + 15776 mRNA_7408 0.80 1.5
207,407 - 15776 mRNA_7408 0.83 0.5
207,540 - 15776 mRNA_7408 0.87 0.6
207,590 + 15776 mRNA_7408 0.89 0.4
207,638 - 0.2
207,703 - 1.1
207,867 - 0.4
207,869 + 1.7
208,014 - 0.1
209,150 + 15777 mRNA_7409 0.16 0.1
209,177 + 15777 mRNA_7409 0.17 0.5
210,021 + 15777 mRNA_7409 0.30 -0.4
210,124 + 15777 mRNA_7409 0.32 0.1
211,046 + 15777 mRNA_7409 0.46 0.5
211,914 - 15777 mRNA_7409 0.60 0.1
212,769 + 15777 mRNA_7409 0.74 1.0
212,906 - 15777 mRNA_7409 0.76 1.4
213,024 - 15777 mRNA_7409 0.78 0.4
213,105 - 15777 mRNA_7409 0.79 1.2
213,241 - 15777 mRNA_7409 0.81 0.7
213,953 - -0.0
213,980 + 0.4
214,103 + -1.0
214,231 - 1.1
214,384 - 0.4
214,388 + 1.2
214,411 + -1.1
214,516 - -0.2
214,528 - 0.1
214,668 - -2.1
214,699 - 2.2
214,812 - 15778 mRNA_7410 0.14 -1.9
214,814 + 15778 mRNA_7410 0.14 0.8
214,980 - 15778 mRNA_7410 0.24 0.6
215,001 - 15778 mRNA_7410 0.25 -1.3
215,007 - 15778 mRNA_7410 0.26 0.2
215,025 + 15778 mRNA_7410 0.27 0.7
215,130 + 15778 mRNA_7410 0.33 -0.8
215,195 + 15778 mRNA_7410 0.38 -0.1