Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7186

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7185: 15553 - K07300 chaA, CAX Ca2+-H+ antiporter, at 1073734 to 1075504 15553 mRNA_7186: 15554 - HMMPfam-alpha/beta hydrolase fold-PF07859,SUPERFAMILY--SSF53474, at 1076175 to 1077434 15554

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,075,714 - -0.9
1,075,717 + 2.1
1,075,751 - -0.4
1,075,774 - 0.4
1,075,867 - 1.3
1,075,886 + 0.2
1,076,020 - -2.0
1,076,028 - -0.5
1,076,029 - 0.1
1,076,043 + 0.3
1,076,045 - 1.2
1,076,048 - 0.3
1,076,055 - 0.1
1,076,056 + -1.0
1,076,056 - 1.2
1,076,090 - 0.3
1,076,110 + 1.7
1,076,133 - 1.1
1,076,197 - 1.0
1,076,210 - -0.8
1,076,241 + 1.6
1,076,478 - 15554 mRNA_7186 0.24 1.6
1,076,485 + 15554 mRNA_7186 0.25 2.1
1,076,487 - 15554 mRNA_7186 0.25 0.0
1,076,956 + 15554 mRNA_7186 0.62 -0.2
1,076,976 - 15554 mRNA_7186 0.64 -1.2
1,077,168 - 15554 mRNA_7186 0.79 0.4
1,077,405 + -1.9
1,077,492 + 0.3
1,077,526 - -0.1
1,077,583 - -0.7
1,077,595 + -0.1
1,077,940 - 2.4
1,078,218 - 1.4
1,078,231 + -1.4
1,078,232 - 0.5
1,078,242 - 1.5
1,078,249 - -0.3
1,078,250 + 1.4
1,078,251 + 1.0
1,078,261 + -0.4
1,078,261 + -0.9
1,078,261 - 0.3
1,078,262 - 0.2
1,078,264 + 0.9
1,078,264 + 0.6
1,078,264 + -0.6
1,078,356 + 0.9
1,078,403 - -0.4