Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6958

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6958: 15326 - K09238 ACE2 metallothionein expression activator, at 534004 to 536795 15326 mRNA_6959: 15327 - K14805 DDX24, MAK5 ATP-dependent RNA helicase DDX24/MAK5, at 537105 to 540222 15327

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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533,036 + 0.0
533,068 + 0.5
533,092 + 0.5
533,098 - -0.6
533,121 + -0.2
533,134 + -0.2
533,159 - 0.3
533,171 + -0.8
533,173 - 0.5
533,174 + -0.5
533,212 + -0.2
533,223 + 0.7
533,224 - 2.0
533,245 - 0.4
533,357 + 1.7
533,376 + 0.3
533,380 + -0.2
533,380 - 1.8
533,383 - 0.2
533,384 + 0.8
533,391 + 1.4
533,395 + -0.2
533,398 - 0.6
533,408 + 1.7
533,408 + -0.3
533,409 + 0.4
533,409 + 0.6
533,409 + 1.2
533,429 - -0.2
533,431 + 0.5
533,432 + 3.0
533,433 - 1.0
533,439 - 0.1
533,446 + 0.7
533,483 + -0.1
533,484 - 0.2
533,485 + 0.3
533,493 - 1.0
533,507 - 1.0
533,514 + 1.2
533,514 - 0.8
533,515 - 0.4
533,522 + -1.2
533,524 - 1.3
533,526 - 0.4
533,685 - 0.4
533,692 - 0.5
533,819 - 1.9
533,851 - -0.3
533,979 - 0.3
533,993 + 0.4
533,996 + 0.2
534,308 - 15326 mRNA_6958 0.11 1.3
534,589 + 15326 mRNA_6958 0.21 1.6
534,838 - 15326 mRNA_6958 0.30 -0.8
535,147 - 15326 mRNA_6958 0.41 0.4
535,150 - 15326 mRNA_6958 0.41 0.3
535,167 + 15326 mRNA_6958 0.42 1.1
535,782 + 15326 mRNA_6958 0.64 -0.0
536,049 + 15326 mRNA_6958 0.73 2.8
536,485 - 15326 mRNA_6958 0.89 -0.2
536,644 - 0.0