Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6825

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6824: 15192 - K03061 PSMC2, RPT1 26S proteasome regulatory subunit T1, at 213876 to 215865 15192 mRNA_6825: 15193 - K08876 SCYL1 SCY1-like protein 1, at 216078 to 219615 15193 mRNA_6826: 15194 - KOG2061 Uncharacterized MYND Zn-finger protein, at 219727 to 220528 15194

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
215,985 + 1.1
215,994 + 1.3
215,998 + 3.2
216,095 + 0.7
216,096 - 0.5
216,128 + 0.5
216,415 + 1.8
216,693 + 15193 mRNA_6825 0.17 2.6
216,713 - 15193 mRNA_6825 0.18 2.0
216,733 + 15193 mRNA_6825 0.19 -0.4
217,168 + 15193 mRNA_6825 0.31 0.3
217,322 - 15193 mRNA_6825 0.35 1.0
217,772 + 15193 mRNA_6825 0.48 1.2
218,251 + 15193 mRNA_6825 0.61 0.4
218,316 - 15193 mRNA_6825 0.63 -0.0
218,354 + 15193 mRNA_6825 0.64 -0.3
218,961 + 15193 mRNA_6825 0.81 2.5
219,080 + 15193 mRNA_6825 0.85 0.3
219,283 + 0.7
219,461 - -0.4
219,509 + 0.8
219,825 + 15194 mRNA_6826 0.12 2.4
220,278 - 15194 mRNA_6826 0.69 -2.0
220,285 + 15194 mRNA_6826 0.70 1.2
220,292 - 15194 mRNA_6826 0.70 -0.6
220,426 + 15194 mRNA_6826 0.87 0.2
220,579 + 0.7
220,605 - -0.1