Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6610

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6609: 14977 - KOG1232 Proteins containing the FAD binding domain, at 1236785 to 1239365 14977 mRNA_6610: 14978 - BLAST related to MSL5-branch point bridging protein [Sporis..., at 1239560 to 1240604 14978 mRNA_6611: 14979 - K03849 ALG8 alpha-1,3-glucosyltransferase, at 1240935 to 1243204 14979

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,238,580 + 14977 mRNA_6609 0.70 1.2
1,238,650 + 14977 mRNA_6609 0.72 -0.3
1,239,011 + 14977 mRNA_6609 0.86 -1.5
1,239,297 + 0.0
1,239,298 - -1.3
1,239,299 + -0.1
1,239,329 + 1.4
1,239,744 - 14978 mRNA_6610 0.18 -2.0
1,239,903 + 14978 mRNA_6610 0.33 -0.6
1,240,459 - 14978 mRNA_6610 0.86 0.4
1,240,771 - 0.1
1,240,880 - 0.0
1,240,891 + 1.9
1,240,900 + 0.4
1,240,919 + -1.6
1,241,061 + 2.6
1,241,067 - 1.6
1,241,176 + 14979 mRNA_6611 0.11 -0.1
1,241,233 - 14979 mRNA_6611 0.13 -0.2
1,241,336 + 14979 mRNA_6611 0.18 -0.5
1,241,385 + 14979 mRNA_6611 0.20 0.5
1,241,421 + 14979 mRNA_6611 0.21 1.3