Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6605

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6604: 14972 - K12812 UAP56, BAT1, SUB2 ATP-dependent RNA helicase UAP56/SUB2, at 1210510 to 1213080 14972 mRNA_6605: 14973 - KOG2177 Predicted E3 ubiquitin ligase, at 1213438 to 1216130 14973 mRNA_6606: 14974 - KOG2761 START domain-containing proteins involved in steroidogenesis/phosphatidylcholine transfer, at 1216222 to 1217950 14974

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,213,231 - 0.6
1,213,248 - 0.9
1,213,386 + -0.5
1,213,537 - 3.2
1,213,687 - -0.8
1,213,837 + 14973 mRNA_6605 0.15 -0.6
1,213,989 - 14973 mRNA_6605 0.20 0.1
1,214,102 + 14973 mRNA_6605 0.25 0.6
1,214,116 + 14973 mRNA_6605 0.25 -1.1
1,214,118 + 14973 mRNA_6605 0.25 -0.7
1,214,474 - 14973 mRNA_6605 0.38 0.8
1,214,503 - 14973 mRNA_6605 0.40 1.0
1,214,515 - 14973 mRNA_6605 0.40 2.6
1,214,560 + 14973 mRNA_6605 0.42 -0.5
1,215,194 + 14973 mRNA_6605 0.65 -0.4
1,215,592 + 14973 mRNA_6605 0.80 1.3
1,216,168 + -0.8
1,216,783 + 14974 mRNA_6606 0.32 -0.6
1,216,794 + 14974 mRNA_6606 0.33 0.2
1,216,805 - 14974 mRNA_6606 0.34 -0.3
1,216,825 - 14974 mRNA_6606 0.35 0.1
1,216,880 - 14974 mRNA_6606 0.38 0.1
1,217,099 - 14974 mRNA_6606 0.51 -0.4