Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6524

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6523: 14891 - K14567 UTP14 U3 small nucleolar RNA-associated protein 14, at 995570 to 999222 14891 mRNA_6524: 14892 - HMMPfam-F-box domain-PF00646,ProSiteProfiles-F-box domain profile.-PS50181,SUPERFAMILY--SSF81383, at 999531 to 1001982 14892 mRNA_6525: 14893 - HMMPfam-WD domain, G-beta repeat-PF00400,ProSiteProfiles-Trp-Asp (WD) repeats profile.-PS50082,ProSiteProfiles-Trp-Asp (WD) repeats circular profile.-PS50294,ProSiteProfiles-LIS1 homology (LisH) motif profile.-PS50896,SMART-WD40 repeats-SM00320,SUPERFAMILY--SSF50978, at 1002265 to 1003923 14893

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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999,329 + -0.4
999,421 - -0.4
999,424 - 0.2
999,769 - 1.0
999,869 + 14892 mRNA_6524 0.14 0.9
1,000,161 + 14892 mRNA_6524 0.26 1.0
1,000,324 - 14892 mRNA_6524 0.32 1.3
1,001,523 + 14892 mRNA_6524 0.81 -1.5
1,001,624 - 14892 mRNA_6524 0.85 -0.5
1,002,218 + -1.5
1,002,342 - -0.8
1,002,503 + 14893 mRNA_6525 0.14 0.6
1,002,504 - 14893 mRNA_6525 0.14 0.1
1,002,534 + 14893 mRNA_6525 0.16 0.5