Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6501

Experiments: YNB Glucose 75mM Arginine

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6500: 14868 - K14416 HBS1 elongation factor 1 alpha-like protein, at 933622 to 935186 14868 mRNA_6501: 14869 - K06902 UMF1 MFS transporter, UMF1 family, at 935425 to 937523 14869 mRNA_6502: 14870 - K02971 RP-S21e, RPS21 small subunit ribosomal protein S21e, at 937840 to 938370 14870

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
remove
935,300 + 1.2
935,855 - 14869 mRNA_6501 0.20 0.6
935,988 - 14869 mRNA_6501 0.27 0.2
936,123 - 14869 mRNA_6501 0.33 -0.4
936,319 + 14869 mRNA_6501 0.43 0.2
936,747 - 14869 mRNA_6501 0.63 1.7
936,882 - 14869 mRNA_6501 0.69 1.1
936,883 + 14869 mRNA_6501 0.69 0.5
937,022 - 14869 mRNA_6501 0.76 2.5
937,335 + 1.5
937,339 - 1.4
937,442 - -0.0
937,460 + -0.6
937,465 + 0.9
937,479 + -1.0
937,787 + 1.1