Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6477

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6476: 14844 - KOG0054 Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily, at 874196 to 881716 14844 mRNA_6477: 14845 - HMMPfam-Catalytic LigB subunit of aromatic ring-opening dioxygenase-PF02900,SUPERFAMILY--SSF53213, at 882440 to 883452 14845 mRNA_6478: 14846 - K15442 TAD3, ADAT3 tRNA-specific adenosine deaminase 3, at 884127 to 886487 14846

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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881,633 + -0.3
881,795 - 0.1
881,906 + 0.0
881,913 - 0.2
881,915 + 0.1
881,916 + -0.7
881,919 + 1.9
881,930 - 0.0
881,942 + 0.3
881,948 + 0.3
881,955 - -0.3
881,958 + -0.6
882,020 - 0.6
882,106 - 2.1
882,111 - 0.2
882,131 + -0.3
882,133 - -2.1
882,173 + 1.6
882,215 + -0.9
882,218 - 0.5
882,224 - 0.1
882,225 - 1.5
882,225 - 1.0
882,227 + 1.1
882,243 + 0.8
882,247 + 0.2
882,282 + 0.8
882,381 + -0.4
882,386 + 0.9
882,529 + 0.3
882,536 - -1.5
882,842 - 14845 mRNA_6477 0.40 1.5
883,129 + 14845 mRNA_6477 0.68 -0.9
883,164 - 14845 mRNA_6477 0.71 -0.4
883,172 + 14845 mRNA_6477 0.72 -1.0
883,209 - 14845 mRNA_6477 0.76 -2.2
883,362 + -0.4
883,450 + 0.2
883,578 - 0.3
883,581 + 1.3
883,687 - 0.2
883,898 - 0.5
884,115 - 1.3