Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6331

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6330: 14698 - K03119 tauD taurine dioxygenase, at 560667 to 562112 14698 mRNA_6331: 14699 - Hypothetical Protein, at 562963 to 566521 14699 mRNA_6332: 14700 - KOG0725 Reductases with broad range of substrate specificities, at 566790 to 568565 14700

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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562,063 + -0.9
562,152 + 0.2
562,175 + 0.3
562,287 - -0.8
562,314 - -1.0
562,321 + 1.1
562,328 - 0.1
562,407 - 0.4
562,467 - 2.7
562,471 + 0.2
562,477 + -0.8
562,480 - 0.3
562,484 - 1.5
562,491 + -0.4
562,496 - -1.9
562,497 + 0.5
562,501 + -0.5
562,503 - -0.3
562,507 + -0.2
562,507 + -0.6
562,511 + 0.8
562,518 + 1.6
562,617 - -1.3
562,619 + 0.9
562,622 - -0.1
562,623 + 0.1
562,624 + -0.6
562,624 + -1.1
562,632 + -0.1
562,633 + 0.7
562,640 - -1.1
562,641 - -0.6
562,646 + 0.7
562,658 + -0.3
562,927 - 0.6
562,932 - 0.9
562,932 - -1.4
562,933 + -1.6
562,942 - 0.4
562,955 + 0.7
563,107 - -0.3
563,239 - -0.0
563,360 + 14699 mRNA_6331 0.11 1.2
563,386 + 14699 mRNA_6331 0.12 0.5
563,812 + 14699 mRNA_6331 0.24 -0.5
563,821 - 14699 mRNA_6331 0.24 -0.1
563,833 + 14699 mRNA_6331 0.24 1.1
563,986 - 14699 mRNA_6331 0.29 -0.4
565,558 + 14699 mRNA_6331 0.73 0.5
565,574 + 14699 mRNA_6331 0.73 -0.4
565,866 + 14699 mRNA_6331 0.82 -0.7
565,910 + 14699 mRNA_6331 0.83 0.2
566,026 + 14699 mRNA_6331 0.86 0.8
566,041 - 14699 mRNA_6331 0.86 -0.0
566,041 - 14699 mRNA_6331 0.86 0.6
566,452 - -0.2
566,515 - 1.9
566,521 + 0.4
566,530 + -0.2
566,541 + 1.3
566,626 - -1.9
566,654 - -0.9
566,657 + -0.3
566,658 - -0.3
566,749 - 1.8
566,816 - -0.3
566,901 + -0.8
566,929 + -0.1
567,109 + 14700 mRNA_6332 0.18 0.3
567,228 - 14700 mRNA_6332 0.25 0.2