Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6291

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6290: 14658 - KOG0394 Ras-related GTPase, at 451269 to 452760 14658 mRNA_6291: 14659 - K12182 HGS, HRS, VPS27 hepatocyte growth factor-regulated tyrosine kinase substrate, at 453109 to 455308 14659 mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455485 to 457859 14660

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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452,250 - 14658 mRNA_6290 0.66 0.1
452,523 + 14658 mRNA_6290 0.84 0.6
452,578 - 14658 mRNA_6290 0.88 -0.1
452,690 - -3.1
452,716 + -0.2
452,841 - -0.4
452,842 - -0.1
452,861 + 1.0
453,036 + 1.6
453,178 - 1.4
453,191 - -0.5
453,217 + 0.9
453,466 + 14659 mRNA_6291 0.16 1.1
453,608 + 14659 mRNA_6291 0.23 -0.1
454,334 + 14659 mRNA_6291 0.56 -0.4
454,784 + 14659 mRNA_6291 0.76 1.8
455,067 + 14659 mRNA_6291 0.89 0.7
455,096 + -0.6
455,184 - 0.4
455,207 - 0.8
455,210 + 1.4
455,213 + 0.1
455,227 + -0.1
455,337 - 0.2
455,400 - 1.3
455,453 + 1.3
455,457 - 0.1
455,459 - -0.4
455,466 + 0.2
455,473 - 0.4
455,571 + -0.5
455,582 - 1.0
455,591 + 2.4
455,591 - -0.2
455,608 - -0.2
455,743 + 14660 mRNA_6292 0.11 0.2
455,769 - 14660 mRNA_6292 0.12 1.5
455,895 - 14660 mRNA_6292 0.17 0.5
456,063 - 14660 mRNA_6292 0.24 0.4