Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6261

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6261: 14629 - K09274 K09274 HMG box factor, other, at 383014 to 384624 14629 mRNA_6262: 14630 - SMART-Gelsolin homology domain-SM00262,SUPERFAMILY--SSF55753, at 385089 to 388417 14630

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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382,089 + -1.0
382,089 + 0.5
382,104 + -0.4
382,110 - 0.1
382,132 + 1.0
382,143 - 0.7
382,189 - -0.8
382,195 - -0.1
382,212 + -0.1
382,220 + -0.4
382,238 - -0.6
382,240 - -0.3
382,249 + -0.1
382,254 - 0.0
382,264 - 0.6
382,289 - -0.9
382,293 - 0.8
382,307 + -0.2
382,324 + 0.8
382,332 + 1.7
382,340 + -0.0
382,345 + -0.5
382,349 - -1.4
382,360 + 0.5
382,363 + -0.2
382,365 + 0.2
382,369 + -0.7
382,370 - 1.4
382,370 - 0.7
382,375 + -0.4
382,381 + 1.6
382,418 - 0.7
382,423 + -0.0
382,433 + 0.9
382,434 - 0.5
382,436 + -0.5
382,436 - -0.1
382,436 - 2.5
382,437 - 0.1
382,448 - -1.8
382,449 + -0.9
382,451 + -0.1
382,471 - -0.4
382,503 + -0.1
382,516 + 1.1
382,529 - -0.8
382,531 + -0.1
382,531 + -0.2
382,535 + 1.8
382,542 + 0.2
382,543 - 0.1
382,546 - -0.0
382,549 - 0.4
382,550 - 0.8
382,556 + -0.4
382,566 - -0.3
382,570 - 1.6
382,571 - 0.8
382,573 - 0.4
382,575 - 1.0
382,583 - 0.3
382,583 - 1.1
382,586 + 0.4
382,586 + -1.0
382,587 + -0.9
382,588 - 0.2
382,588 - -0.9
382,590 - -0.9
382,592 - 0.5
382,594 + 1.0
382,603 + 0.5
382,652 - 1.2
382,663 - 0.4
382,691 - 0.6
382,695 + 0.1
382,700 + 0.1
382,707 - 2.2
382,713 - 1.1
382,724 + 1.1
382,726 + 0.6
382,732 + -1.1
382,866 - -0.5
382,884 + 0.2
383,004 - 1.4
383,005 + 1.3
383,014 - -0.1
383,016 + 0.6
383,158 - 0.7
383,166 + -1.0
383,738 - 14629 mRNA_6261 0.45 -0.3
383,822 + 14629 mRNA_6261 0.50 0.3
383,893 - 14629 mRNA_6261 0.55 -0.1
383,903 + 14629 mRNA_6261 0.55 0.5
384,042 - 14629 mRNA_6261 0.64 1.0
384,044 + 14629 mRNA_6261 0.64 -0.1
384,045 - 14629 mRNA_6261 0.64 -1.3
384,188 + 14629 mRNA_6261 0.73 -1.0
384,494 - 0.6
384,502 - 0.3
384,654 - -0.9
384,686 - -1.7
384,779 - 0.6
384,801 - -1.2
384,803 - 0.6
384,812 + 2.0
384,823 - 0.2
384,848 - 0.1
384,850 - 2.7
384,867 + -0.5
384,877 - -0.2
384,883 - 2.2
384,893 - 0.4
384,894 - 0.7
384,897 + -0.0
384,897 + 0.1
384,899 + 1.0
384,900 + 0.2
384,905 - 1.5
384,933 + -0.7
384,934 - 0.3
384,934 - -0.1
384,939 + -1.1
384,940 - 0.3
384,940 - 0.1
384,946 + 2.0
384,955 + -0.1
384,964 - 0.9
384,976 + 0.0
384,983 - 1.0
384,993 - 1.1
385,074 - 0.2
385,079 - 0.2
385,080 + -0.2
385,087 - 2.8
385,091 + 0.3
385,092 - 0.0
385,186 + 0.5
385,217 + -0.7
385,257 - 0.9
385,276 + -0.2
385,297 - -0.2
385,329 - 3.4
385,332 + 0.1
385,363 - 0.6
385,389 - -0.6
385,394 - -0.2
385,401 - 1.0
385,558 + 14630 mRNA_6262 0.14 1.5