Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6242

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6241: 14609 - Hypothetical Protein, at 333735 to 334704 14609 mRNA_6242: 14610 - K00826 E2.6.1.42, ilvE branched-chain amino acid aminotransferase, at 335352 to 337546 14610 mRNA_6243: 14611 - Hypothetical Protein, at 337932 to 340072 14611

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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334,402 + 14609 mRNA_6241 0.69 -0.1
334,534 - 14609 mRNA_6241 0.82 1.3
334,682 + -0.4
334,682 - 1.5
334,705 + -1.6
334,938 + 0.2
335,105 - 0.0
335,214 + 0.4
335,268 - 0.1
335,289 - -0.7
335,292 + 2.8
335,384 + -0.1
335,432 - 1.5
335,433 + 0.8
335,494 + -0.3
335,574 - 14610 mRNA_6242 0.10 -0.3
335,597 + 14610 mRNA_6242 0.11 1.9
335,741 + 14610 mRNA_6242 0.18 1.0
335,753 + 14610 mRNA_6242 0.18 0.6
336,063 - 14610 mRNA_6242 0.32 -1.0
336,189 + 14610 mRNA_6242 0.38 0.8
336,663 + 14610 mRNA_6242 0.60 0.9
336,764 - 14610 mRNA_6242 0.64 0.4
336,776 + 14610 mRNA_6242 0.65 0.1
337,073 + 14610 mRNA_6242 0.78 0.2
337,340 + 1.9
337,646 + 1.3
337,784 - 0.9
338,228 + 14611 mRNA_6243 0.14 -0.5
338,399 + 14611 mRNA_6243 0.22 2.1