Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6223

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6222: 14590 - K07088 K07088 uncharacterized protein, at 285427 to 287812 14590 mRNA_6223: 14591 - BLAST acetyl-coenzyme A synthetase [Rhizoctonia solani AG-1..., at 288357 to 288729 14591 mRNA_6224: 14592 - Hypothetical Protein, at 289691 to 292264 14592

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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287,376 - 14590 mRNA_6222 0.82 0.7
287,382 + 14590 mRNA_6222 0.82 -0.9
287,793 - 0.2
288,060 + 0.2
288,060 - 2.1
288,078 - -0.2
288,079 + 1.5
288,086 + 0.2
288,089 + 0.4
288,110 - 0.8
288,113 - 1.6
288,117 - -0.4
288,129 - 1.3
288,229 + -0.2
288,246 - -0.1
288,387 - 0.1
288,536 - 14591 mRNA_6223 0.48 0.7
288,548 + 14591 mRNA_6223 0.51 0.8
288,553 + 14591 mRNA_6223 0.53 1.2
288,558 + 14591 mRNA_6223 0.54 0.2
288,558 + 14591 mRNA_6223 0.54 -1.3
288,561 - 14591 mRNA_6223 0.55 0.3
288,563 + 14591 mRNA_6223 0.55 -0.4
288,565 - 14591 mRNA_6223 0.56 2.0
288,566 + 14591 mRNA_6223 0.56 -0.3
288,568 + 14591 mRNA_6223 0.57 -0.4
288,573 + 14591 mRNA_6223 0.58 0.9
288,608 + 14591 mRNA_6223 0.67 -0.2
288,693 - 0.6
288,704 + 0.0
288,707 + 1.4
288,715 + 0.9
288,717 + 0.4
288,718 - -1.8
288,997 + 0.4
289,024 - 0.4
289,173 + -1.4
289,429 + 0.9
289,447 + -0.6