Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6191

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6190: 14558 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 215040 to 217246 14558 mRNA_6191: 14559 - K01485 codA cytosine deaminase, at 218019 to 218832 14559 mRNA_6192: 14560 - Hypothetical Protein, at 219520 to 220950 14560

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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217,049 - 0.7
217,056 + 1.2
217,057 + -0.3
217,058 - -0.1
217,065 - -0.2
217,071 + 3.0
217,209 + 2.3
217,210 + 0.1
217,220 + 0.8
217,236 - 0.8
217,345 - -1.1
217,351 - 0.7
217,352 + -1.2
217,352 - -0.1
217,363 - 1.9
217,363 - 0.1
217,365 - -0.4
217,366 + 0.1
217,367 - 0.3
217,369 - -0.2
217,370 + -0.0
217,372 - -1.6
217,372 + 0.0
217,372 - 0.9
217,383 + 0.7
217,385 + 0.5
217,390 - 1.2
217,391 + 1.6
217,392 + 1.6
217,392 + -0.6
217,396 - 0.4
217,398 - 1.1
217,408 + -0.0
217,429 - -0.7
217,441 + -0.7
217,460 - 0.6
217,465 + 0.1
217,488 + -0.1
217,549 - 1.3
217,572 + 0.3
217,575 - 1.4
217,594 - -0.3
217,605 + 1.4
217,620 + -0.1
217,623 - -1.1
217,625 - -0.2
217,626 + 0.5
217,628 - -0.0
217,630 - 0.7
217,631 + 0.5
217,633 + 1.2
217,634 + 1.3
217,638 - 1.5
217,639 - 1.0
217,646 - 1.2
217,653 + 0.1
217,655 + -0.3
217,662 - 0.2
217,677 - -0.2
217,694 - 1.3
217,695 + -0.4
217,696 + -0.4
217,706 + 0.3
217,707 + 1.6
217,721 + 0.0
217,739 + -0.1
217,750 + 0.8
217,772 + -0.4
217,777 + 0.3
217,778 + -0.2
217,787 + -0.4
217,801 + 1.1
217,801 + 0.4
217,808 + 2.1
217,818 + -1.6
217,822 - 0.4
217,823 + 0.3
217,823 - -0.0
217,824 + 1.0
217,825 - -0.8
217,825 - 0.3
217,825 + -0.9
217,832 + 1.0
217,833 + 1.9
217,835 + 0.4
217,837 + 1.3
217,841 + -0.2
217,842 + -0.4
217,848 - 0.3
217,851 + -0.6
217,855 - -1.1
217,859 + -0.4
217,874 + -0.6
217,985 + -0.4
217,995 + 2.0
218,006 + -0.1
218,011 - 0.3
218,152 + 14559 mRNA_6191 0.16 0.6
218,164 + 14559 mRNA_6191 0.18 -1.4
218,268 - 14559 mRNA_6191 0.31 0.5
218,294 - 14559 mRNA_6191 0.34 -0.4
218,752 + 1.0
219,011 - 0.3
219,135 + -0.1
219,142 - -1.3
219,151 + 0.7
219,156 + -0.6
219,157 - 0.1
219,161 - 0.1
219,161 - -0.4
219,175 - -0.9
219,179 + -0.6
219,188 + 0.1
219,210 - 1.4
219,216 + 0.8
219,228 + -1.0
219,229 + -0.6
219,232 + -0.6
219,288 + -0.4
219,290 + 1.4
219,320 - 1.1
219,328 + -0.4
219,486 + 0.6
219,617 - 0.1
219,654 - 1.4
219,664 + 14560 mRNA_6192 0.10 2.5
219,775 + 14560 mRNA_6192 0.18 0.6
219,795 - 14560 mRNA_6192 0.19 -0.9