Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6119

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6118: 14486 - K03164 TOP2 DNA topoisomerase II, at 31417 to 38158 14486 mRNA_6119: 14487 - K15280 SLC35C2 solute carrier family 35, member C2, at 38335 to 41391 14487 mRNA_6120: 14488 - K05954 FNTB protein farnesyltransferase subunit beta, at 41541 to 43349 14488

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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37,569 + 1.5
37,968 + 0.4
37,991 - -0.5
38,175 + 0.4
38,190 + 1.4
38,282 - 0.1
38,287 - -0.4
38,342 + 0.8
38,345 - 0.2
38,448 + 0.6
38,489 + 1.1
38,700 - 14487 mRNA_6119 0.12 -0.4
38,738 + 14487 mRNA_6119 0.13 0.2
38,906 + 14487 mRNA_6119 0.19 -0.3
39,074 + 14487 mRNA_6119 0.24 0.6
39,195 - 14487 mRNA_6119 0.28 0.2
39,308 - 14487 mRNA_6119 0.32 -2.5
40,072 - 14487 mRNA_6119 0.57 -0.6
40,621 - 14487 mRNA_6119 0.75 0.8
40,748 + 14487 mRNA_6119 0.79 0.0
40,770 - 14487 mRNA_6119 0.80 -0.0
40,776 + 14487 mRNA_6119 0.80 -0.4
41,064 - 14487 mRNA_6119 0.89 1.0
41,171 - -1.3
41,348 - 2.1
41,392 - 1.7
41,508 - 1.5