Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6092

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6091: 14459 - KOG1515 Arylacetamide deacetylase, at 1626072 to 1627990 14459 mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460 mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1631626 to 1633865 14461

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,627,313 + 14459 mRNA_6091 0.65 -0.6
1,627,583 - 14459 mRNA_6091 0.79 1.3
1,627,595 + 14459 mRNA_6091 0.79 -1.0
1,627,627 - 14459 mRNA_6091 0.81 -0.6
1,627,840 - 0.9
1,627,883 - 1.1
1,627,909 + 1.7
1,627,912 + -0.4
1,627,920 + 0.8
1,628,036 + -0.2
1,628,204 + -0.4
1,628,218 + 1.5
1,628,470 + -0.7
1,628,473 + 0.8
1,628,484 - 0.8
1,628,686 - 14460 mRNA_6092 0.15 0.5
1,629,115 + 14460 mRNA_6092 0.29 -2.9
1,629,185 + 14460 mRNA_6092 0.31 0.0
1,629,236 - 14460 mRNA_6092 0.33 -0.8
1,629,306 + 14460 mRNA_6092 0.35 -0.9
1,629,352 + 14460 mRNA_6092 0.36 -1.4
1,629,823 + 14460 mRNA_6092 0.51 0.5
1,629,934 - 14460 mRNA_6092 0.55 0.1
1,629,988 - 14460 mRNA_6092 0.56 0.8
1,630,026 + 14460 mRNA_6092 0.58 0.8
1,630,188 - 14460 mRNA_6092 0.63 0.1
1,630,414 + 14460 mRNA_6092 0.70 -1.8
1,630,856 - 14460 mRNA_6092 0.84 0.8
1,630,994 - 14460 mRNA_6092 0.88 0.8
1,631,003 - 14460 mRNA_6092 0.88 1.1
1,631,018 + 14460 mRNA_6092 0.89 0.4
1,631,473 + 0.8
1,631,889 + 14461 mRNA_6093 0.12 1.3
1,631,903 + 14461 mRNA_6093 0.12 0.2
1,632,293 + 14461 mRNA_6093 0.30 1.4
1,632,329 - 14461 mRNA_6093 0.31 -0.7
1,632,333 + 14461 mRNA_6093 0.32 -0.5