Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5835

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5834: 14202 - HMMPfam-Protein of unknown function (DUF1688)-PF07958, at 1048946 to 1050486 14202 mRNA_5836: 14204 - Hypothetical Protein, at 1051031 to 1051324 14204 mRNA_5835: 14203 - Hypothetical Protein, at 1051444 to 1053111 14203 mRNA_5837: 14205 - Hypothetical Protein, at 1053180 to 1053560 14205 mRNA_5838: 14206 - Hypothetical Protein, at 1053748 to 1057363 14206

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,050,472 + 0.6
1,050,499 + -0.6
1,050,793 + 0.4
1,050,802 + 0.3
1,050,927 + -0.2
1,050,960 - 0.3
1,050,971 + 1.4
1,050,971 + -0.2
1,050,971 + -0.5
1,050,972 - -0.1
1,050,989 + 0.3
1,051,248 - 14204 mRNA_5836 0.74 0.8
1,051,253 - 14204 mRNA_5836 0.76 -0.9
1,051,570 + -0.1
1,051,811 + 14203 mRNA_5835 0.22 0.3
1,052,280 + 14203 mRNA_5835 0.50 0.6
1,052,433 + 14203 mRNA_5835 0.59 -0.3
1,052,717 - 14203 mRNA_5835 0.76 0.1
1,052,992 - 1.2
1,053,011 - 0.0
1,053,020 - 1.2
1,053,134 - 0.4
1,053,176 - 0.3
1,053,302 - 14205 mRNA_5837 0.32 1.6
1,053,302 + 14205 mRNA_5837 0.32 1.5
1,053,316 - 14205 mRNA_5837 0.36 -0.7
1,053,331 - 14205 mRNA_5837 0.40 -0.1
1,053,455 - 14205 mRNA_5837 0.72 -3.7
1,053,597 - 2.0
1,053,773 - -0.2
1,054,005 + 3.3