Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5829

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5828: 14196 - KOG0725 Reductases with broad range of substrate specificities, at 1036637 to 1037941 14196 mRNA_5829: 14197 - K00228 CPOX, hemF coproporphyrinogen III oxidase, at 1038121 to 1039722 14197 mRNA_5830: 14198 - HMMPfam-Mitochondrial protein Pet127-PF08634, at 1040175 to 1043789 14198

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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1,037,218 + 14196 mRNA_5828 0.45 0.2
1,037,233 + 14196 mRNA_5828 0.46 1.6
1,037,617 + 14196 mRNA_5828 0.75 0.1
1,037,621 - 14196 mRNA_5828 0.75 1.4
1,037,779 + 14196 mRNA_5828 0.88 0.4
1,037,779 - 14196 mRNA_5828 0.88 -0.6
1,037,830 + 3.9
1,037,889 + 0.0
1,037,909 - 0.4
1,037,910 + 2.5
1,037,927 + 0.6
1,037,947 - -0.1
1,037,948 + 1.0
1,038,086 - -0.5
1,038,096 - -1.2
1,038,109 - 0.5
1,039,325 + 14197 mRNA_5829 0.75 0.6
1,039,341 + 14197 mRNA_5829 0.76 1.1
1,039,371 + 14197 mRNA_5829 0.78 0.7
1,039,376 + 14197 mRNA_5829 0.78 2.5
1,039,378 - 14197 mRNA_5829 0.78 0.5
1,039,387 + 14197 mRNA_5829 0.79 0.4
1,039,402 - 14197 mRNA_5829 0.80 0.8
1,039,473 + 14197 mRNA_5829 0.84 0.4
1,039,473 + 14197 mRNA_5829 0.84 0.8
1,039,487 + 14197 mRNA_5829 0.85 0.1
1,039,489 + 14197 mRNA_5829 0.85 -0.6
1,039,506 + 14197 mRNA_5829 0.86 0.3
1,039,511 + 14197 mRNA_5829 0.87 0.6
1,039,528 - 14197 mRNA_5829 0.88 0.7
1,039,535 - 14197 mRNA_5829 0.88 0.7
1,039,560 - 14197 mRNA_5829 0.90 0.5
1,039,569 - 1.2
1,039,576 - -0.3
1,039,598 + -2.2
1,039,603 + 0.1
1,039,608 - 1.0
1,039,610 + 1.7
1,039,613 - 0.9
1,039,617 + 0.4
1,039,621 + 1.0
1,039,631 + 0.6
1,039,634 - 0.9
1,039,636 - 2.5
1,039,640 - 0.8
1,039,648 - 0.5
1,039,663 + 2.3
1,039,663 + 0.3
1,039,671 - 0.9
1,039,677 + 1.5
1,039,683 + 0.8
1,039,693 - -0.9
1,039,700 - 0.7
1,039,705 - 1.2
1,039,707 - -0.4
1,039,709 + 0.7
1,039,712 - 0.2
1,039,714 - 1.0
1,039,714 - 0.4
1,039,715 + 2.1
1,039,715 + 0.4
1,039,717 + 0.3
1,039,719 + 0.7
1,039,723 + 1.3
1,039,723 + 0.7
1,039,726 + 1.2
1,039,729 - 0.1
1,039,729 + 0.6
1,039,733 - 1.3
1,039,733 - 0.1
1,039,734 - 0.2
1,039,737 + -0.4
1,039,738 - -0.4
1,039,739 - 0.5
1,039,749 - 0.4
1,039,758 + -0.1
1,039,758 + 0.9
1,039,762 - 0.8
1,039,764 - 1.3
1,039,767 - -2.4
1,039,768 + 0.7
1,039,776 - 0.2
1,039,781 - 0.2
1,039,790 + -2.5
1,039,799 + 0.1
1,039,800 - 0.1
1,039,806 + -0.1
1,039,812 + 0.1
1,039,812 + 1.3
1,039,813 + 0.5
1,039,818 + 0.5
1,039,818 + 0.2
1,039,826 + 1.5
1,039,827 - 0.7
1,039,833 + 0.3
1,039,853 + 0.5
1,039,886 - 0.8
1,039,944 - 0.2
1,039,954 - 0.8
1,040,100 + -0.1
1,040,105 + 1.0
1,040,139 - -0.1