Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5597

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5596: 13964 - KOG2806 Chitinase, at 469041 to 471762 13964 mRNA_5597: 13965 - Hypothetical Protein, at 472641 to 473822 13965 mRNA_5598: 13966 - KOG0118 FOG RRM domain, at 474328 to 475458 13966

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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472,120 - -0.4
472,134 + 1.9
472,135 + 0.7
472,155 + -0.3
472,172 + 1.6
472,187 - -0.7
472,188 + 0.5
472,309 - 0.9
472,362 - 1.3
472,367 - 0.5
472,380 + -0.0
472,381 + 1.4
472,387 + 2.3
472,389 + -0.6
472,395 + -0.7
472,395 - 1.0
472,404 + 0.7
472,405 + 0.3
472,406 - -0.9
472,416 + 1.4
472,535 - -0.7
472,572 - -2.1
472,694 - -2.4
472,833 - 13965 mRNA_5597 0.16 -0.4
472,845 + 13965 mRNA_5597 0.17 -0.2
473,242 - 13965 mRNA_5597 0.51 0.0
473,258 + 13965 mRNA_5597 0.52 0.4
473,450 - 13965 mRNA_5597 0.68 -1.2
474,411 - 0.5