Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5539

Experiments: YNB Glucose 75mM Arginine

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5538: 13906 - Hypothetical Protein, at 327452 to 328556 13906 mRNA_5539: 13907 - HMMPfam-NmrA-like family-PF05368,SUPERFAMILY--SSF51735, at 328856 to 330220 13907 mRNA_5540: 13908 - Interpro GDP-fucose protein O-fucosyltransferase, at 330944 to 333027 13908

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose 75mM Arginine
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327,904 - 13906 mRNA_5538 0.41 0.6
327,938 - 13906 mRNA_5538 0.44 2.1
327,961 + 13906 mRNA_5538 0.46 -0.3
327,963 - 13906 mRNA_5538 0.46 0.4
328,079 - 13906 mRNA_5538 0.57 0.0
328,079 - 13906 mRNA_5538 0.57 0.4
328,138 - 13906 mRNA_5538 0.62 0.4
328,245 + 13906 mRNA_5538 0.72 2.2
328,251 + 13906 mRNA_5538 0.72 -0.1
328,270 - 13906 mRNA_5538 0.74 -0.4
328,524 - 1.4
328,535 + -0.7
328,537 + 0.3
328,540 - -0.3
328,546 - 2.0
328,690 + -2.4
329,242 + 13907 mRNA_5539 0.28 0.7
329,267 - 13907 mRNA_5539 0.30 -0.0
329,597 - 13907 mRNA_5539 0.54 0.6
329,604 - 13907 mRNA_5539 0.55 -0.7
329,708 - 13907 mRNA_5539 0.62 0.3
329,859 + 13907 mRNA_5539 0.73 2.5
329,996 + 13907 mRNA_5539 0.84 -0.1
330,435 + -0.0
330,445 - 0.9
330,574 - -0.4
330,579 - -0.6
330,580 + 0.3
330,589 - -0.0
330,728 + 1.0
330,737 - 0.3
330,753 + 1.9
330,753 + 1.8
330,761 + 0.6
330,861 - 0.7
330,870 - 2.9
330,897 - 1.2
331,024 - 1.1